Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0784 ATGCAACTCGGTGTTTCCTCAAATCTTATGCCCTACCTAGTGCTTGAGCCTGAAGAAATGTTCAAAGATGGTGTCATTCTGCATAGTTCATCAACCCCATCAATGGCTTTTGCTCCCATGTCACGCCCATTTTGGTGCATCCACCttcttattttttgcttaaCCTTACTTTGGCTCCAATTTATAATACCTGCATCTGCATTAGGAAATGAGAGTGATTATTTGGCGTTGCTCAAGTTTAATGAGTCAATCTCCAGTGATCCTAATCAAATGCTGAGCTCTTGGAATACTTCAAATCACTTTTGCAACTGGCATGGAGTCACATGCAGCCACAAGCATCAGAGAGTGACAGAGTTGAAGCTGGAAGGATATGGTTTGCGTGGGACCATATCTCCTCATGTTGGCAACCTCTCCTTCTTGAGAAATCTTAGCCTGGACAGCAACTACTTCCATGGAGAAATTCCAGCAGAGTTGGGTCGTTTGTTTAGGTTGCAGAACCTCAATCTCTCGGATAATGAGTTGATAGGGGAGATTCCCATCAACTTGACTGGCTGCACTGAATTAAGGTACTTATGTTTGAATATGAATAAGCTTAGTGGCATAATACCAAATGAAATAGGCTCCCTTAGGAAGCTTAAGGAGTTGTACCTTTATAGAAACAATTTAACTGGATATATCCCAGCTTCCATGTGGAATGTTTCTTCCCTTGAGCAGCTGTCCATGGCTTATAACAACTTGGAAGGGAGCATACCAGAAGAAATAGAGcatttgaaaaacttgatatttttctcAATACCTGTAAACAGATTTTCTGGTGCGCTTCCTTCTTCACTTTACAATATGTCATCTCTCACACGATTATCACTAGCAGCTAATCATCTGAATGGCACTCGACTTCCAAACAACATGTTCTCCACCCTCTCTAATTTGCAAGAGTTTTATATAGGTGGGAATCAAATCTCAAGTTCAATCCCAACTTCCATCTCAAATTCATCTTCTCTTCGGTTATTTGATATTAGTGAAAACTACTGTGTCGGAAAAGTTCCAAGTCTAGGAAACCTAAAAGATCTTGAAATGCTAAATTTGGCAATAAATAGTCTTGGCAGTAGTTCCAGTAGTGACTTGGATTTTATAACATCGCTAGAAAATTGTACtcaattgaaaattttgggTCTAGATCACAACAAATTTGGAGGAAGTTTACCTAACTCCATTGCCAATTTGTCAACCCAACTCATTCAACTCTTCCTTGGTGGTAATCAGTTTTATGGAACAATTCCTACAACTTTAGGAAAGTACACAAAGTTGGTTGCATTAGGTTTGGAGTCCAACCAGTTTACAGGCACCATTCCAGCTACGTTTGGGGAGTTTTATCAAATGCAATCAATGACTTTGGGGGAAAACCAACTCAATGGGGAGATACCATCCTCTTTAGGAAATCTCAGTGAATTAGTTGAACTATACTTTTCAGAGAATAAACTTGAAGGAAAAATTCCACCTATATTTGGAAAATGGAAGTATTTGACATTTCTAGACCTTTCCAAAAATAATCTCAGTGGAGCTATACCCTTGCAGATTTTCAGTCTTTCCTCGTTGTCTCAATCACTGAATTTATCTCACAATTCATTGAATGGATCTTTGCCTATTGAGGTAGAAAACCTTAAAAATCTTGGCACTATGGACATCTCTGAAAATCATCTTTCTGGTGAGATTCCTAAGACCATTGGAAAGTGCATCACAATGGAATACCTTTATTTACAAGGGAATAGGTTTAGCGGAACCATGCCTCCTTCACTAGCTTCAATGAAAAACCTTATGTATCTTGATTTATCAAGAAACAACTTGTCTGGATCAATACCAACGGGTTTACAGAACATTTCTGTTCTTAAATACTTGAATGTTTCCTTCAATCTGTTGGAAGGTGAGGTACCAATTGAAGGGGTTTTCAAGAATGCAAGTGCAATATCAATGGCTGGTAACAATAAACTTTGTGGGGGCATCTTTGAGTTGCATTTATCACCATGTTCTATCAAAGTTGATACACAAAGCAAACACCATAATTTGAGGCTCatggtaattttaatttgtgtggCTGTTTGTCTTCTCTTATCATCTATTCTTGCCATCTACTGgacaaggaaaagaaacaagacATCTTCTTCAACTTCACCAACAATTGACCAGCTTGCCATGGTTTCATACCAAAATCTACACAATGCAACCGAAGGATTCTCCATTGTCAACTTGATAGGATCTGGGAGTTTTGGCTCAGTTTATAAAGGAAGGATTGAATCATATGACAGACTTGTTGCTATAAAGGTCCTAAATCTTCAAAGGAAGGGAGCTCACAAGAGTTTCATCTCTGAGTGCAATGCACTTAAAAATATTAGGCATCGAAatcttattaagattttaacGTGTTGCTCAAGCATTGATTATAAAGGCCAAGAATTTAAAGCACTAATCTTTGAGTACATGTCCAATGGAAGCATAGACGAATGGTTGCATACTGTTGCGGAAAGTCTAGATCAACCTAGAACTTTAGGTCTTGATCGAAGATTAAATATCCTCTATGATGTTGCTTCTGCACTGCATTATCTTCACTGTGAATGCGAGCAACCTGTTGTCCATTGTGATTTAAAGCCGAGCAACATCCTTCTTGATGATGATACCGTTGCTCATGTGAGTGATTTTGGGTTAGCAAGACTTCTCTCAATTTTTAATGGCATCTCTCAAAAGCAAAGCAGTACAACTGGAATAAAAGGAACTATTGGCTACGCTCCTCCAgAGTATGGAACAGGTTCTGAAGTGTCAACACAAGGTGATGTATATTCTTTTGGGATTCTTGTTTTGGAAATGGTAACTGGAAGAAGACCTACAGAAGATATGTTTAAAGATGGTCATGATCTTCGTAGCTATGTGAGAACTGCATATCCAAATAACATTTTGGAGATTGTTGACTCAACTCTGCTACGAAATCAAATACAACCAACAACAGCAGTAGCAGAAGAAATCAGCATGGAGGAGTTGATTCCTATGCATCCTAATGAAGAGAAGGCTATAATTTCACTATTGGGGATTGGACTAGCTTGCTCAGTGGAATCTCCAAAAGAAAGATTGAATATGATGGATGTCACAAGAGAgcttaatcaaattaaaaatgccTTTCATTCTCATGGGTAA 3183 0.372 MQLGVSSNLMPYLVLEPEEMFKDGVILHSSSTPSMAFAPMSRPFWCIHLLIFCLTLLWLQFIIPASALGNESDYLALLKFNESISSDPNQMLSSWNTSNHFCNWHGVTCSHKHQRVTELKLEGYGLRGTISPHVGNLSFLRNLSLDSNYFHGEIPAELGRLFRLQNLNLSDNELIGEIPINLTGCTELRYLCLNMNKLSGIIPNEIGSLRKLKELYLYRNNLTGYIPASMWNVSSLEQLSMAYNNLEGSIPEEIEHLKNLIFFSIPVNRFSGALPSSLYNMSSLTRLSLAANHLNGTRLPNNMFSTLSNLQEFYIGGNQISSSIPTSISNSSSLRLFDISENYCVGKVPSLGNLKDLEMLNLAINSLGSSSSSDLDFITSLENCTQLKILGLDHNKFGGSLPNSIANLSTQLIQLFLGGNQFYGTIPTTLGKYTKLVALGLESNQFTGTIPATFGEFYQMQSMTLGENQLNGEIPSSLGNLSELVELYFSENKLEGKIPPIFGKWKYLTFLDLSKNNLSGAIPLQIFSLSSLSQSLNLSHNSLNGSLPIEVENLKNLGTMDISENHLSGEIPKTIGKCITMEYLYLQGNRFSGTMPPSLASMKNLMYLDLSRNNLSGSIPTGLQNISVLKYLNVSFNLLEGEVPIEGVFKNASAISMAGNNKLCGGIFELHLSPCSIKVDTQSKHHNLRLMVILICVAVCLLLSSILAIYWTRKRNKTSSSTSPTIDQLAMVSYQNLHNATEGFSIVNLIGSGSFGSVYKGRIESYDRLVAIKVLNLQRKGAHKSFISECNALKNIRHRNLIKILTCCSSIDYKGQEFKALIFEYMSNGSIDEWLHTVAESLDQPRTLGLDRRLNILYDVASALHYLHCECEQPVVHCDLKPSNILLDDDTVAHVSDFGLARLLSIFNGISQKQSSTTGIKGTIGYAPPEYGTGSEVSTQGDVYSFGILVLEMVTGRRPTEDMFKDGHDLRSYVRTAYPNNILEIVDSTLLRNQIQPTTAVAEEISMEELIPMHPNEEKAIISLLGIGLACSVESPKERLNMMDVTRELNQIKNAFHSHG 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0784 1060 SUPERFAMILY Protein kinase-like (PK-like) 717 1049 IPR011009 -
Sto6g0784 1060 ProSiteProfiles Protein kinase domain profile. 744 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0784 1060 Gene3D Transferase(Phosphotransferase) domain 1 826 1059 - -
Sto6g0784 1060 SMART serkin_6 744 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0784 1060 Gene3D Ribonuclease Inhibitor 385 676 IPR032675 -
Sto6g0784 1060 SMART LRR_sd22_2 307 333 - -
Sto6g0784 1060 SMART LRR_sd22_2 209 235 - -
Sto6g0784 1060 SMART LRR_sd22_2 354 377 - -
Sto6g0784 1060 SMART LRR_sd22_2 481 510 - -
Sto6g0784 1060 SMART LRR_sd22_2 602 628 - -
Sto6g0784 1060 Pfam Protein kinase domain 746 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0784 1060 Gene3D Ribonuclease Inhibitor 73 182 IPR032675 -
Sto6g0784 1060 Gene3D Ribonuclease Inhibitor 264 384 IPR032675 -
Sto6g0784 1060 Gene3D Ribonuclease Inhibitor 183 263 IPR032675 -
Sto6g0784 1060 SUPERFAMILY L domain-like 70 367 - -
Sto6g0784 1060 Pfam Leucine rich repeat 187 246 IPR001611 GO:0005515
Sto6g0784 1060 Pfam Leucine rich repeat 581 639 IPR001611 GO:0005515
Sto6g0784 1060 ProSitePatterns Serine/Threonine protein kinases active-site signature. 875 887 IPR008271 GO:0004672|GO:0006468
Sto6g0784 1060 Gene3D Phosphorylase Kinase; domain 1 705 825 - -
Sto6g0784 1060 Pfam Leucine rich repeat N-terminal domain 71 110 IPR013210 -
Sto6g0784 1060 SMART LRR_typ_2 233 257 IPR003591 -
Sto6g0784 1060 SMART LRR_typ_2 307 331 IPR003591 -
Sto6g0784 1060 SMART LRR_typ_2 529 554 IPR003591 -
Sto6g0784 1060 SMART LRR_typ_2 209 232 IPR003591 -
Sto6g0784 1060 SMART LRR_typ_2 602 625 IPR003591 -
Sto6g0784 1060 SMART LRR_typ_2 481 504 IPR003591 -
Sto6g0784 1060 SMART LRR_typ_2 281 306 IPR003591 -
Sto6g0784 1060 SMART LRR_typ_2 161 185 IPR003591 -
Sto6g0784 1060 PANTHER LRR RECEPTOR-LIKE KINASE 58 1057 - -
Sto6g0784 1060 ProSitePatterns Protein kinases ATP-binding region signature. 750 773 IPR017441 GO:0005524
Sto6g0784 1060 PRINTS Leucine-rich repeat signature 508 521 - -
Sto6g0784 1060 PRINTS Leucine-rich repeat signature 602 615 - -
Sto6g0784 1060 PANTHER OS04G0122200 PROTEIN 58 1057 - -
Sto6g0784 1060 SUPERFAMILY L domain-like 410 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0784 Sto-Chr6 7880358 7886911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0784 70 1056 Receptor kinase-like Gene Family AT3G47570 46.647 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto6g0784 Pkinase 5.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0784 - - gmx:100785561 1137.09