Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0780 ATGGCTTTTGCTCCCATCTCAATCCTTATTTTCTACGTAGCCTTACTTTGGCTTCAACATATGAGAGTTTCATCTGCATTATCAAGGAATAATGAGAGTGATCATTTGGCATTGCTCAAGTTTCATGAATCAATATCCAATGATCCTCATCAAATCCTGAGCTCATGGAATGCTTCAAATCACTTTTGCAACTGGCATGGAGTCACATGCAGCCACAAGCATCAAAGAGTCACAGAGTTGAAGCTGCAAGGATATGGCTTGCGCGGGACGGTATCTCCTCATGTTGGCAACCTCTCCTTCTTGAGAAATCTCGGCCTCGGCAGCAACTACTTCCACGGAGAAATTCCAGCAGAGTTGGGTCGTTTGTTCAGGTTGAAGAACCTCTCCCTATGGGATAATGCATTGACTGGGGAGATTCCCATCAACTTGACAAGCTGCATTGAACTGAGGTACTTACGTTTGTCAGAAAACGGTTTTATTGGCATAATACCAAATGGACTAGGCTCCCTTAGGAAGCTTGAAATGTTGCACCTTGATTCAAACAATTTAACTGGATATATTCCAGCTTCCATTTGGAATCTCTCTTCCCTTAAGGTTCTATCCGTGGGTTATAACAACTTGGAAGGGAGCATACCAGAAGAAATAAACCAATTGGAAAACTTGATCATTTTAGCAATACATGCAAACAAATTTTCTGGTGCATTTCCTTCTTCACTTTACAATATGTCATCTCTCACAATAATATCAGCAGCAAATAATCAACTGAATGTCACCCAGCTTCCACACAACATGTTCTCCACCCTCTTTAATTTGCAACAGTTTGGCATAGCTGGGAATCAAATTGCAGGTTTCATTCCAACTTCCATCTCAAATGCATCTTCTCTTCAACTATTTGATATTGGTGGTAACTACTTTGTTGGAAAAGTTCCAAGTCTAGGAAACCTAAAAGATCttagtttattagatttggAATTAAATAATCTTGGCGGTAGTTCCAACAGTGACTTGGATTTTATAACATCTCTAGAAAACTGTAGTCAATTGGAAATATTGAGTCTAGCTAGCAACAATTTTGGAGGAATTTTGCATAATTCCATAGCCAATTTATCAACCCAACTCATGTATCTCTACCTTGGTGGTAATCAGTTACATGGAGCAATTCCTGCAAGTTTAGGAAAGTACCTAAATTTGATTGGCTTGAGTCTAGAATCAAACAAGTTTATAGGCACCATTCCAACATCCTTTGGGAAGTTTCATAAGTTGCAAATCTTAGTTTTGCAGGGAAACCAACTCTCAGGAGAGATACCAACCTGCTTAGGCAACCTCAGTCAACTAGTTGAAATAAGGATTTCGGAGAACAAGCTTCAAGGAAAAATTCCACCTATATTTGGAAAAATGAAGCACTTGTCATCACTAGATCTTTCAAAAAACAATCTTAGTGGAGTTATACCCTTGCAGATTTTAAGTCTTTCCTCGTTGTCCAAGTTACTCAATTTATCTCACAATTCATTGAATGGCTCTTTGCCTATTGAGATAGGAACCCTCAAAGCCCTAGGGACTTTTGATATTTCTGAAAATGACCTTTCTGGTTTACAAAACATTTCGGTCCTTGAATACGTGAATGTTTCTTTCAATATGTTGGATGGTGAGGTTCCAAAAGAAGGAGTTTTCAAGAATGCAAGTGCAATATCGGTGGTTGGATATGGGAGTTTTGGCTCAGTATATAGAGGAAGGATTGAATCAGAAGACAAATTTGTTGCTATAAAGGTACTAAACCTTCAAAAGAAGGGAGGTGGAAAGAGTTTCGATTTTGAATGCAATGCACTTAAGAATATTCGGCATCGAAATCTGGTTAAGATTTTAACATGTTGCTCAAGCATTGATTATAAAGGCCAAGAATTTAAAGCACTAGTCTTTGAGTACATGTCAAATGGAAGCCTTGATGAATGGTTGCATAGTCTTGCAGAAAGTGTAGATCAACCTAGAACTTTGGATCTTGATCGAAGATTTAATATCCTCTATGATGTTGCTTCTGCACTGCATTATCTTCACTGTGAATGCGAGCAACCTATTGTCCATTGTGATTTAAAGCCGAGAAACATCCTTCTTGATGATGATATGGTTGCTCATGTGAGTGATTTTGGATTAGCGAGACTTCTCTCAACTTTTAATGGCGTTCCCCAAAAGCAAAGCAGTACAACTGGAATAAAAGGAACTATTGGTTATGCTCCTCCAgTTTTGGAAATGCTAACCGGAAGAAGACCTACAGATGATATATTTAAAGATGGTCATGATCTTCATAGCTACGTGAGAACTGCTTGTCCGAATAAGCTTTTGGAGATTGTTGACTCAGCTCTTCTACGAAAACAAACACAGCAGCCATCAACTGCAGTAGCAAAAGAAATCATCATGGAAGAGTTAATTCCTATGCATCCTAATGAAGAGAAGGCTATATTTTCACTATTTGGGATTGGACTTGCTTGCTCAATGGAATCACCGAAAGAAAGACTCAACATGATGGATGTCACAAGGGAGCTAAATCAAATTACAAAAGTCTTCCACTCTCGTCAATAA 2574 0.3842 MAFAPISILIFYVALLWLQHMRVSSALSRNNESDHLALLKFHESISNDPHQILSSWNASNHFCNWHGVTCSHKHQRVTELKLQGYGLRGTVSPHVGNLSFLRNLGLGSNYFHGEIPAELGRLFRLKNLSLWDNALTGEIPINLTSCIELRYLRLSENGFIGIIPNGLGSLRKLEMLHLDSNNLTGYIPASIWNLSSLKVLSVGYNNLEGSIPEEINQLENLIILAIHANKFSGAFPSSLYNMSSLTIISAANNQLNVTQLPHNMFSTLFNLQQFGIAGNQIAGFIPTSISNASSLQLFDIGGNYFVGKVPSLGNLKDLSLLDLELNNLGGSSNSDLDFITSLENCSQLEILSLASNNFGGILHNSIANLSTQLMYLYLGGNQLHGAIPASLGKYLNLIGLSLESNKFIGTIPTSFGKFHKLQILVLQGNQLSGEIPTCLGNLSQLVEIRISENKLQGKIPPIFGKMKHLSSLDLSKNNLSGVIPLQILSLSSLSKLLNLSHNSLNGSLPIEIGTLKALGTFDISENDLSGLQNISVLEYVNVSFNMLDGEVPKEGVFKNASAISVVGYGSFGSVYRGRIESEDKFVAIKVLNLQKKGGGKSFDFECNALKNIRHRNLVKILTCCSSIDYKGQEFKALVFEYMSNGSLDEWLHSLAESVDQPRTLDLDRRFNILYDVASALHYLHCECEQPIVHCDLKPRNILLDDDMVAHVSDFGLARLLSTFNGVPQKQSSTTGIKGTIGYAPPVLEMLTGRRPTDDIFKDGHDLHSYVRTACPNKLLEIVDSALLRKQTQQPSTAVAKEIIMEELIPMHPNEEKAIFSLFGIGLACSMESPKERLNMMDVTRELNQITKVFHSRQ 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0780 857 Gene3D Transferase(Phosphotransferase) domain 1 646 746 - -
Sto6g0780 857 Gene3D Transferase(Phosphotransferase) domain 1 747 856 - -
Sto6g0780 857 SUPERFAMILY Protein kinase-like (PK-like) 556 846 IPR011009 -
Sto6g0780 857 PANTHER LRR RECEPTOR-LIKE KINASE 565 853 - -
Sto6g0780 857 PANTHER LRR RECEPTOR-LIKE KINASE 21 530 - -
Sto6g0780 857 PANTHER LRR RECEPTOR-LIKE KINASE 530 567 - -
Sto6g0780 857 SUPERFAMILY L domain-like 340 565 - -
Sto6g0780 857 SUPERFAMILY L domain-like 31 328 - -
Sto6g0780 857 Pfam Protein kinase domain 563 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0780 857 Gene3D Ribonuclease Inhibitor 341 565 IPR032675 -
Sto6g0780 857 SMART serkin_6 560 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0780 857 SMART LRR_typ_2 242 267 IPR003591 -
Sto6g0780 857 SMART LRR_typ_2 418 442 IPR003591 -
Sto6g0780 857 SMART LRR_typ_2 490 515 IPR003591 -
Sto6g0780 857 SMART LRR_typ_2 466 489 IPR003591 -
Sto6g0780 857 SMART LRR_typ_2 194 218 IPR003591 -
Sto6g0780 857 SMART LRR_typ_2 170 193 IPR003591 -
Sto6g0780 857 Gene3D Ribonuclease Inhibitor 33 145 IPR032675 -
Sto6g0780 857 Gene3D Ribonuclease Inhibitor 146 340 IPR032675 -
Sto6g0780 857 Pfam Leucine rich repeat 372 431 IPR001611 GO:0005515
Sto6g0780 857 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Sto6g0780 857 PANTHER OS04G0122200 PROTEIN 21 530 - -
Sto6g0780 857 PANTHER OS04G0122200 PROTEIN 565 853 - -
Sto6g0780 857 PANTHER OS04G0122200 PROTEIN 530 567 - -
Sto6g0780 857 Gene3D Phosphorylase Kinase; domain 1 566 645 - -
Sto6g0780 857 ProSiteProfiles Protein kinase domain profile. 560 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0780 857 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Sto6g0780 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 691 703 IPR008271 GO:0004672|GO:0006468
Sto6g0780 857 ProSitePatterns Protein kinases ATP-binding region signature. 566 589 IPR017441 GO:0005524
Sto6g0780 857 ProSiteProfiles Leucine-rich repeat profile. 468 489 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0780 Sto-Chr6 7857480 7860665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0780 31 853 Receptor kinase-like Gene Family AT3G47570 34.770 2.20e-156 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto6g0780 Pkinase 3.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0780 - - ahf:112742943 803.897