Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0779 ATGGAAGGTACACCGAAAGAAGGTTCTGGTTCCAGTACATCGCGTTCTGCAGCCACGAACGAAATGAGCTATAGGAAGGATCCGTTTTATCTCCATCCTTCGGATACTTCTGGCTTGAAGTTGATTCCAAATCAACTTTCTGAAGATAACTATGCGATTTGGAAGAGAGCAATGACTATTGCTTTGAAGACCAAGAATAAACTTCGTTTTGTTGACGGATCCATCAAGCAACCTGCAGATCAGAATTCTGAAGCATACATGAGCTGGAGTTTTGTTGATTCTGCCGTTACTGGATGGTTGTTACACACAATGTGTAAAGATATGTACGAGGCTTTCATGTTCACACCGACAGCAAGGCAAATTTTGAAAGAGCTTGAAGAGAAGTATGGTCAAACGAGTCGGCCTCAATTGATGCATGTTAAAAGGCAATTAGCAATGCTACAACGAGGTAATGACTCTCTTGCTGTTTATTCTACAAAATTGAAGAAGCTATGGGATGAATTTTGTAGTTTACAGCCCAGGATAAGTTGTGAATGTGAAAAATCTGCTAAGGAATGGGAGGAGATTAATAATTCGAATTACGTAGATCAATTCCTTATGGGCTTGGGGGAAGCTTATGAAACCGTGGTAGATAATATTCTTATGATGGAACCGGTGCCATCATATAATAGAGTGTGTGCAATGGTGGCTCGTGTAGAGAGTCAGAGGAGTATATCTTCTAAGAATTCGGCACAGGTTGAGGCTAGTGCTTTGCTAGCTAAATTCACTGATGCACAGAAGAATCTTGCTTCTGGATCGAAGTATTATGATATAAAGAAggagaaggcatccaagtttTGCACTCATTGTCGCAGAACTGGACACACAGAAGACGAATGCTTCAGGAAGATTGGTTATCCTGAATGGTTCAAGGAGCTAAAAAATCAGAAAGGTAAGAAGCCAACTGACTCTGTTAATTTAGTTACTGATGATGAAAGCACAGGTCAGAAATCTAAGGTGAATGATGGAGATAAGCAAACGATGGCTGAGCTAATACAAGAAGAACAGAAGAAGTTGATGAAAGGCAATGGAGGTGGTAACAATGCTGAAACCCCTTTGGCTGCAACATATTTTGCAGATTTCGCAGGTAATGTTGTGACTGATTATCTCGGTTACTTTACTGCTAAAAATGCTAGTACTCGTTGGATAATTGACTCTGGTGCGTCAAGTCATGTCACTGGCAATTTAGACTTGTTAAAGGATGTCTTAGAACCTAGGGGCAAGAATACGGTTCAGTTGCCCGACGGGATTACCAAACGGGTTCAGTATGTAGGCAATGTGATATTGGGAGGAAAATTGATTCTTAGAAATGTTCTATATGTTCCTGACTTCAAATATAATTTGATCTCAGTAAATAAGCTGGCTGTATGCTCGGGTTTAGAAACCATTTTTCATGAAAATGGTTGCATGATGCAGGACCGATTGACTAAGAAACCTTTGGTAAGAGGCAGTGTATTAAAGAATTTGTATATTCTGGAGGAAGAAGGAGTTAAAGTTCTGCAGAATAAAGATTCATTAGTTTGTAAAAttgatgataataattctagTGCCTTGTGGCATGCACGGTTGGGACACCCTTCTGATGGTGTGGTGTCTCACATTGCTGGAATTGATAAGATTGGTTGTAATACTGCCTGTAATACTTGTCATCTTGCAAAACAAACTCGGTTTTCATTTCCTGTAAGTGAGACTATTAcagatgaatgttttgaattgTTGCATATTGATGTATGGGGTCCATATAGCATTGAATCTCTTTCTGTACTAAGGTGGAAGTCACCTTATGAAGTGCTTAACAAAAGGGTTCCTGATTATTCAACCCTGAAAGTGTTTGGTAGCTTGTGTTATGCTACAAACACAGAtccaaagaagaagaaatttgaTGAGAGGGCTAGGAAGTGCATTTATTTGGGAGTAGCACATGGTTTTAAGGGTTCCAAGGTATATGATCTGGTGGATAAGAAGACTCTTATCAATAGAGATGTGAAGTTTTATGAGAATATCTTCCCTTTTGAAAAGGGAAAACTGGTGGAAGATTCAAGGTTAACTCCTACTTCATTTTGTGATCCTCAATTTGGTGATCTTCCTTTTAGTTTTGATTCACAGGTGGTTCATTCAGAGGATGTTCGCACTGACAATCCAGTTACATCAGATGCACAGGTTAATGATTCTGAAGTTTTGTCCGACTCAGGGCATACACAAGATGGTGATAATGAGGAAGAATGCCATGATATTGCAGATGCAGAGCCTGTAGAAGATGTTCCTGCTGTGTCAACACAACAGGATGTTATAAGAAGAagtgaaagagagaagaagacaCCTACATGGTTGAAGGACTTTGTCACGTGTTCTGTGGTTTTCAATCTTTCCTGGTTGTCTAAGTCACTAAATTTATCTCACAATTCATTGGAAGGCTATTTGCCTATTGAGGTTGGAAACCTTAAAAACCTTGACACTTTGGACATCTCTGAAAATCATCTTTCTGGTGAGATTCCTAAAACCATTGGAGAGTGCATAACAATGGAATACCTTTATTTACAAGGGAATAGGTTTAGCGGAACCATGCCTCCTTCACTAGCTTCATTGAAAAACCTTATGTATCTTGATTTATCAAGAAACAACTTGTCTGGATCAATACCAACGGGTTTACAGAACATTTCTGTTCTTGAATACTTGAATGTTTCCTTTAATCTGTTGGAAGGTGAGGTACCAATTGAAGGGGTTTTCAAGAATGCAAGTGCAATATCAATGGCTGGTAACAATAAGCTTTGTGGAGGTATCTCCGAGCTGCTTTTATCACCATGCCCTGTCAAAGTTCACACACAAAGTAAACACCATAATTTGAAGCTCAcagtaattttaatttgtgtggCTGTTTCTCTTCTTTTGTCATCTATTCTTGCCATCTACtggaggaggaaaagaaacaagaCATCTTCTTCAACTTCACCAACAATTGACAAGATTTCCATGGTGTCATACCAAAATCTACACAAAGCAACCAACGGATTCTCCATTGTCAACTTTATAGGATCTGGGAGTTTTGGCTCAGTATATAAAGGAAGGATTGAATCAGAAGACAAACTTGTTGCTATAAAGGTTCTAAATCTTCAAAAGAAGGGAGCTCACAAAAGTTTCATCTCTGAGTGCAATGCACTTAAGAATATTAGGCATCGGAATCTAAATAAGATTTTAACGTGTTGCTCAAGCATTGATTATAAAGGCCAAGAATTTAAAGCACTAGTCTTTGAGTACATGTCGAATGGAAGCCTAGACGAATGGTTGCATACTGTTGCGGAAAGTCTAGATCAACCTAGAACTTTAGGTCTTGATCGAAGATTAAATATCCTTTATGATGTTGCTTCTGCACTGCATTATCTTCACTATGAATGCAACCAATTTGTTGTCCATTGTGATTTAAAGCCGAGCAACATCCTTCTTGATGATGATATGGTTGCTCATGTGAGTGATTTTGGGTTAGCTAGACTTCTCTTAACTTTTAATGGCGTCTCTCAAAAGCAAACTTGTACAACTGGAATAAAAGGAACTCTCGGCTATGCTCCTCCAGAAGAAATGTTCAAAGATGGTCTCAATCTGCATAGCTATGTGAAAGCAGCATATCCAAATAACCTTTGGGAGATTGTGGACTCAGTTCTTCTGCCAATACAAGTACAGGAGAAAGCAACATCAGGGAATAAAGAAATCAGCATAGAGGAGCCAATCTTTAAGCAGAAGAATCCTAATGAAGAGAAGGCTATAATTTCATTATTTCAGATTGGACTTGCTTGTTCAGTAGAATCACCAAAAGAAAGACTGAACATAATGGATGTCATAAGTGAGCTAAATCATATTAGAAATGCTTTTCATTCTAGTTAA 3915 0.3742 MEGTPKEGSGSSTSRSAATNEMSYRKDPFYLHPSDTSGLKLIPNQLSEDNYAIWKRAMTIALKTKNKLRFVDGSIKQPADQNSEAYMSWSFVDSAVTGWLLHTMCKDMYEAFMFTPTARQILKELEEKYGQTSRPQLMHVKRQLAMLQRGNDSLAVYSTKLKKLWDEFCSLQPRISCECEKSAKEWEEINNSNYVDQFLMGLGEAYETVVDNILMMEPVPSYNRVCAMVARVESQRSISSKNSAQVEASALLAKFTDAQKNLASGSKYYDIKKEKASKFCTHCRRTGHTEDECFRKIGYPEWFKELKNQKGKKPTDSVNLVTDDESTGQKSKVNDGDKQTMAELIQEEQKKLMKGNGGGNNAETPLAATYFADFAGNVVTDYLGYFTAKNASTRWIIDSGASSHVTGNLDLLKDVLEPRGKNTVQLPDGITKRVQYVGNVILGGKLILRNVLYVPDFKYNLISVNKLAVCSGLETIFHENGCMMQDRLTKKPLVRGSVLKNLYILEEEGVKVLQNKDSLVCKIDDNNSSALWHARLGHPSDGVVSHIAGIDKIGCNTACNTCHLAKQTRFSFPVSETITDECFELLHIDVWGPYSIESLSVLRWKSPYEVLNKRVPDYSTLKVFGSLCYATNTDPKKKKFDERARKCIYLGVAHGFKGSKVYDLVDKKTLINRDVKFYENIFPFEKGKLVEDSRLTPTSFCDPQFGDLPFSFDSQVVHSEDVRTDNPVTSDAQVNDSEVLSDSGHTQDGDNEEECHDIADAEPVEDVPAVSTQQDVIRRSEREKKTPTWLKDFVTCSVVFNLSWLSKSLNLSHNSLEGYLPIEVGNLKNLDTLDISENHLSGEIPKTIGECITMEYLYLQGNRFSGTMPPSLASLKNLMYLDLSRNNLSGSIPTGLQNISVLEYLNVSFNLLEGEVPIEGVFKNASAISMAGNNKLCGGISELLLSPCPVKVHTQSKHHNLKLTVILICVAVSLLLSSILAIYWRRKRNKTSSSTSPTIDKISMVSYQNLHKATNGFSIVNFIGSGSFGSVYKGRIESEDKLVAIKVLNLQKKGAHKSFISECNALKNIRHRNLNKILTCCSSIDYKGQEFKALVFEYMSNGSLDEWLHTVAESLDQPRTLGLDRRLNILYDVASALHYLHYECNQFVVHCDLKPSNILLDDDMVAHVSDFGLARLLLTFNGVSQKQTCTTGIKGTLGYAPPEEMFKDGLNLHSYVKAAYPNNLWEIVDSVLLPIQVQEKATSGNKEISIEEPIFKQKNPNEEKAIISLFQIGLACSVESPKERLNIMDVISELNHIRNAFHSS 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0779 1304 ProSitePatterns Protein kinases ATP-binding region signature. 1023 1046 IPR017441 GO:0005524
Sto6g0779 1304 SMART serkin_6 1017 1301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0779 1304 Pfam Protein kinase domain 1019 1205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0779 1304 SUPERFAMILY Protein kinase-like (PK-like) 990 1294 IPR011009 -
Sto6g0779 1304 Pfam Leucine rich repeat 854 912 IPR001611 GO:0005515
Sto6g0779 1304 MobiDBLite consensus disorder prediction 310 338 - -
Sto6g0779 1304 Gene3D Transferase(Phosphotransferase) domain 1 1099 1303 - -
Sto6g0779 1304 SUPERFAMILY L domain-like 799 938 - -
Sto6g0779 1304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1148 1160 IPR008271 GO:0004672|GO:0006468
Sto6g0779 1304 MobiDBLite consensus disorder prediction 721 742 - -
Sto6g0779 1304 Gene3D Ribonuclease Inhibitor 786 957 IPR032675 -
Sto6g0779 1304 Pfam gag-polypeptide of LTR copia-type 32 79 IPR029472 -
Sto6g0779 1304 Pfam GAG-pre-integrase domain 501 567 IPR025724 -
Sto6g0779 1304 PANTHER LRR RECEPTOR-LIKE KINASE 797 1203 - -
Sto6g0779 1304 PANTHER LRR RECEPTOR-LIKE KINASE 1201 1302 - -
Sto6g0779 1304 Gene3D Phosphorylase Kinase; domain 1 978 1098 - -
Sto6g0779 1304 ProSiteProfiles Protein kinase domain profile. 1017 1299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0779 1304 MobiDBLite consensus disorder prediction 721 781 - -
Sto6g0779 1304 MobiDBLite consensus disorder prediction 313 327 - -
Sto6g0779 1304 PANTHER OS04G0122200 PROTEIN 797 1203 - -
Sto6g0779 1304 PANTHER OS04G0122200 PROTEIN 1201 1302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0779 Sto-Chr6 7843700 7851729 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0779 807 944 Receptor kinase-like Gene Family AT3G47570 38.129 1.13e-14 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto6g0779 Pkinase 7.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0779 - - gmx:100801459 603.979