Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0778 ATGGCTTTTGCCTCCATGTCTCATCCATATTGGTGCATCCATCTTCAAGCGATCCTTATATTTTGCATAACCTTACTTTGGCTACAATATACGAGAGTTGCCTCTGCATCAGGGAATGATACTGATTATTTGGCATTGCTCAAGTTTCAAGAATCAATATCAAGTGATCCTTATCATGTCATGAGCTCTTGGAATGCTTCAAATCACTTCTGCAACTGGCATGGAATCACATGCAGCCACAAGCATCAAAGAGTCACAGGATTGAAGCTGAGAGGATATGGTTTGCGTGGGGTCGTATCGCCCCACCTTGGCAACCTCTCCTTCTTGAGAAATCTCAACCTTGACAACAACAGCTTTTATGGAGAAATTCCAGCAGAGTTGGGTCGATTGTTTAGGTTGCAGAACCTCACTGTCCGGAATAATACATTGAAAGGAGATATCCCCATCAACTTGACAAGATGCACTGAAATGAGGCAACTGGTTTTGTCTAGCAATAGTCTTACTGGCAAGATACCACTTGAGATTGGCTCCCTCAATAAGCTCGAAAGGTTGTCCCTTTTTACAAACAAATTAACAGGACAAATACCAGCTTCTGTGTGGAATCTTACTTCCCTTCTTTTTCTGACTGTGGGTTTTAACAACTTTGAAGGGAGCATACCAGAAGAAATCGGCCATTTGAAAAACTTGAGTTTTTTATCAATAGATGGCAACAAGTTTTTTGGTGAGCTTCCTTCTTCACTTTACAATTTGTCATCTCTCACAGTAATATCAGTTGCATCTAATCAGCTAATCCATGGCACTCTCCCAAACAACTTGTTCTCCAATCTCCCTAATTTGCAAGTGTTAAATTTAGATGGGAATCAAATTTCAGGTTCAATCCCAACTTCCATCACAAATGCATCTTTTCTTCAAACATTTGATATTAGTGATAACTACTTTGTTGGAAAAATTCCAAGTCTAGAAAAGCTAAAGCATCTTCAATGGCTAAACCTGGCAGGGAATATTCTTGGCAACAATTTCAATAATGACTTGGATTTCATAAAATCTCTAAAAAATTGTAGTGAATTGGAAGTATTGGGTCTAGCTAACAACAATTTTGGAGGTGTTTTACCAGATTCCATAGCAAATTTGTCAACCCAACTCGTTCAACTAGCCATTGGTGGAAATAACATATATGGAACAATTCCTGCAACTTTAGGAAAGTACACAAATTTGATTGCCTTGGCTTTGGGATTCAATCGTCTTACAGGCACCATTCCAGCTTCATTTGGGAAGCTTCAAAAGATACAATTATTAGAATTGGGGGAAAACCAATTCTCTGGAGAGATACCAATCTCTTTAGGCAACCTTAGTCAACTAGTTGAACTAAGCATTCCAAAGAATAACCTTGAAGGAAAAATTCCACCCATCTTTGGAAATTGGAAGTATTTGCTATTCCTATACCTTTCAGTAAACAATTTTACAGGAGACATACCCTTTCAGGATTTGAGTGTTTCCCCCTTGTCCAAGTTGTTGAACTTATCTCACAATTCATTTAATGGTTCTTTGCCTGTTGAGGTGGGAGCCCTTAAAAACCTTGGGACTATGGATATCTCTGAAAATTATCTTTTTGGTGAGATTCCTGAGACCATTGGAGAGTGCATAAGTTTACAAAACATTTCTGTTCTTGAATATTTGAACATTTCTTTCAATATGTTGGATGGTGAGGTTCCAACAGAAGGAGTTTTTAGGAATGCAAGTGCAATATCAGTGGTTGGTAATAATAAGCTTTGTGGGGGCATCTCTGAGCTACATTTGAAACCATGCCCAATCAAACTTAACCAACAAAGTAAACACCGCCATCTAAAGTTCTCAGTAATTATCATTTGTGTGGCGGTTTGTGTTTCTCTTCTGTTGTCATCAATTCTTGTCATTCATTGGAggaggaaagaaaacaaaacatcATCTTCAACCGCTCCAACAATTGATCAGCTTTCCAAGGTGTCATACCAAAATTTGCACTCTGCAACCGAAGGGTTCTCCACCATCAACTTGATAGGATATGGGAGTTTTGGCTCAGTATATAAAGGAAGGCTGGAATCAGAAGACAAAATTGTTGCTGTAAAGGTTCTAAACCTTCAAAAGAAGGGAGCTCACAAGAGCTTCATTTCAGAGTGTAATGCACTTAAAAATTGCAGGCATCGAAATCTCGTCAAGGTTTTAACATGTTGCTCGAGCATTGATTATAAGGGCCAGGAATTTAAAGCACTAGTTTTTGAGTACATGTCGAATGGAAGCCTAGAAGAATGGTTGCATATGGATGCAGAAAGTCTTGATCATCAACCTAGAACTTTAGGTCTTGACCGAAGATTAAATATCCTCTATGATGTTGCCTCTGCACTACATTATCTTCACTATGAATGCGAGCAACCTGTTGTCCATTGTGATTTAAAGCCAAGCAACATCCTTCTTGATGATGATATGGTTGCTTATGTGAGTGATTTTGGGTTATCAAGACTTATCTCAACCTTTAATGGCACCTCTAATAAGCAGAACAGTACAACTGGAATAAAAGGAACTATTGGCTATGCTCCTCCAGAGTATGGAATAGGTTCTGAGATATCAACACAGGGTGATGTATATTCTTTTGGAATTCTTGTTTTGGAAATGCTAACGGGAAGAAGACCCACAGAAGAAATGTTCAAAGATGGCCTCAATCTTCATAGCTATGTGAAAGCTGCATATCCAAATAACCTTTGGAAGATTGTGGACTCAGTTCTTCTACCAATGCAAGTACAGGAGAAGACAAAATCAGCGATGGAAGAAATCAGCATTGAGGAGCCAATCCTTAAGCATCCTAATGAAGAAAAGGCTATACATTCACTATTTGGGATTGGAATTGCTTGTTCAGTAGAATCACCAAAAGAAAGACTTAACATGATGGATGTCACAAGAGAGCTGAATAGGATTAGAAATGCTTTTCGTTCTTGTGAATGA 2976 0.3834 MAFASMSHPYWCIHLQAILIFCITLLWLQYTRVASASGNDTDYLALLKFQESISSDPYHVMSSWNASNHFCNWHGITCSHKHQRVTGLKLRGYGLRGVVSPHLGNLSFLRNLNLDNNSFYGEIPAELGRLFRLQNLTVRNNTLKGDIPINLTRCTEMRQLVLSSNSLTGKIPLEIGSLNKLERLSLFTNKLTGQIPASVWNLTSLLFLTVGFNNFEGSIPEEIGHLKNLSFLSIDGNKFFGELPSSLYNLSSLTVISVASNQLIHGTLPNNLFSNLPNLQVLNLDGNQISGSIPTSITNASFLQTFDISDNYFVGKIPSLEKLKHLQWLNLAGNILGNNFNNDLDFIKSLKNCSELEVLGLANNNFGGVLPDSIANLSTQLVQLAIGGNNIYGTIPATLGKYTNLIALALGFNRLTGTIPASFGKLQKIQLLELGENQFSGEIPISLGNLSQLVELSIPKNNLEGKIPPIFGNWKYLLFLYLSVNNFTGDIPFQDLSVSPLSKLLNLSHNSFNGSLPVEVGALKNLGTMDISENYLFGEIPETIGECISLQNISVLEYLNISFNMLDGEVPTEGVFRNASAISVVGNNKLCGGISELHLKPCPIKLNQQSKHRHLKFSVIIICVAVCVSLLLSSILVIHWRRKENKTSSSTAPTIDQLSKVSYQNLHSATEGFSTINLIGYGSFGSVYKGRLESEDKIVAVKVLNLQKKGAHKSFISECNALKNCRHRNLVKVLTCCSSIDYKGQEFKALVFEYMSNGSLEEWLHMDAESLDHQPRTLGLDRRLNILYDVASALHYLHYECEQPVVHCDLKPSNILLDDDMVAYVSDFGLSRLISTFNGTSNKQNSTTGIKGTIGYAPPEYGIGSEISTQGDVYSFGILVLEMLTGRRPTEEMFKDGLNLHSYVKAAYPNNLWKIVDSVLLPMQVQEKTKSAMEEISIEEPILKHPNEEKAIHSLFGIGIACSVESPKERLNMMDVTRELNRIRNAFRSCE 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0778 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Sto6g0778 991 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Sto6g0778 991 Gene3D Ribonuclease Inhibitor 218 265 IPR032675 -
Sto6g0778 991 ProSiteProfiles Leucine-rich repeat profile. 278 300 IPR001611 GO:0005515
Sto6g0778 991 SUPERFAMILY Protein kinase-like (PK-like) 647 980 IPR011009 -
Sto6g0778 991 SUPERFAMILY L domain-like 340 592 - -
Sto6g0778 991 Gene3D Transferase(Phosphotransferase) domain 1 755 989 - -
Sto6g0778 991 SMART LRR_typ_2 250 275 IPR003591 -
Sto6g0778 991 SMART LRR_typ_2 106 130 IPR003591 -
Sto6g0778 991 SMART LRR_typ_2 276 304 IPR003591 -
Sto6g0778 991 SMART LRR_typ_2 202 226 IPR003591 -
Sto6g0778 991 SMART LRR_typ_2 523 547 IPR003591 -
Sto6g0778 991 PANTHER LRR RECEPTOR-LIKE KINASE 550 988 - -
Sto6g0778 991 PANTHER LRR RECEPTOR-LIKE KINASE 27 550 - -
Sto6g0778 991 Pfam Protein kinase domain 674 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0778 991 ProSiteProfiles Protein kinase domain profile. 673 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0778 991 SUPERFAMILY L domain-like 40 336 - -
Sto6g0778 991 Gene3D Ribonuclease Inhibitor 35 98 IPR032675 -
Sto6g0778 991 PANTHER OS04G0122200 PROTEIN 27 550 - -
Sto6g0778 991 PANTHER OS04G0122200 PROTEIN 550 988 - -
Sto6g0778 991 Gene3D Ribonuclease Inhibitor 266 603 IPR032675 -
Sto6g0778 991 Gene3D Ribonuclease Inhibitor 99 217 IPR032675 -
Sto6g0778 991 ProSitePatterns Protein kinases ATP-binding region signature. 679 702 IPR017441 GO:0005524
Sto6g0778 991 SMART serkin_6 673 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0778 991 Gene3D Phosphorylase Kinase; domain 1 634 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0778 Sto-Chr6 7834944 7838167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0778 39 987 Receptor kinase-like Gene Family AT3G47570 43.500 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto6g0778 Pkinase 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0778 - - qlo:115986118 951.814