Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0730 ATGACAAACAAATCCGACGACGGCGACGACGCTGGCGATAATCATAAAAATACGATGTCAAAGCAACTTTATCAGATCAATGGAGTACCAAATAAGagaaagaagagattaAAGAAAGTTAGAGAGATGTCTGTTCCAAGAGGTAGTAGTACAGAGAGTAATAAGGCCCTTCAGGTGAAGGAAGGAGCAGTGGtagcttcctcttcttcttcctcatggaACACCCTAACCAACTCTTTCCCTCCTAATTTTCCTCTACACAAGAGAAGCAAAATTGAAGAGAGTGATGAAGATCTGTTCACAGTGCCAGACGTGGAAGGAACAGCAGCAAATGTGGAATGTGTGAcaaatggaaataaaatgaagCAAAGCAATAGCTTGACAGTGACGACAGAGCAGGCTCCTCAGTTTCAGACAAAGCGTAGAAGAGGAAGAAATCCTGCTGATAAAGAATGCCGACGCCTCAAGAGGTTGTTGAGAAATAGGGTTTCTGCTCAACAAgccagagagagaaagaaagtgtatgtgaatgagttgGAATCAAGAGCTAAAGAGTTGCAAGACCAGAATTCTAAGTTAGAAGAACGTATTTCAACTTTGATCAATGAGAACACAATGCTGCGTAAGGTTCTTATGAACACAAGGCCTAAAGCTGATGACACCAATGAACCAAAGCAAGACCAGTTAAGTAAAAGCTAG 699 0.3648 MTNKSDDGDDAGDNHKNTMSKQLYQINGVPNKRKKRLKKVREMSVPRGSSTESNKALQVKEGAVVASSSSSSWNTLTNSFPPNFPLHKRSKIEESDEDLFTVPDVEGTAANVECVTNGNKMKQSNSLTVTTEQAPQFQTKRRRGRNPADKECRRLKRLLRNRVSAQQARERKKVYVNELESRAKELQDQNSKLEERISTLINENTMLRKVLMNTRPKADDTNEPKQDQLSKS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0730 232 SUPERFAMILY Leucine zipper domain 153 212 IPR046347 GO:0003700|GO:0006355
Sto6g0730 232 MobiDBLite consensus disorder prediction 1 16 - -
Sto6g0730 232 MobiDBLite consensus disorder prediction 1 60 - -
Sto6g0730 232 Gene3D Single helix bin 172 213 - -
Sto6g0730 232 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 151 214 IPR004827 GO:0003700|GO:0006355
Sto6g0730 232 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 66 232 IPR044280 GO:0000981|GO:0045944
Sto6g0730 232 Coils Coil 169 210 - -
Sto6g0730 232 SMART brlzneu 149 213 IPR004827 GO:0003700|GO:0006355
Sto6g0730 232 MobiDBLite consensus disorder prediction 211 232 - -
Sto6g0730 232 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 66 232 - -
Sto6g0730 232 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 156 171 IPR004827 GO:0003700|GO:0006355
Sto6g0730 232 MobiDBLite consensus disorder prediction 213 232 - -
Sto6g0730 232 MobiDBLite consensus disorder prediction 46 60 - -
Sto6g0730 232 CDD bZIP_HY5-like 163 204 - -
Sto6g0730 232 Pfam bZIP transcription factor 150 209 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0730 Sto-Chr6 7506205 7522223 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0730 140 220 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 81.481 4.86e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto6g0730 bZIP_1 1.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0730 K16241 - gmx:778143 219.164