LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto6g0695	ATGAATTGCTTTCCTTGTTTTTCTTGCAACGACAAGAAAGCGTCGCAGAAAAAGCCTAAACAAGTAGTTAGAACACAAATTAATGCAAATCAACCTCAAAAGGAAGCCTTACTCCCTCAGCCACGATCAGATAATCAAGGTTCTAAACAAAATGAAGATAGATTAAATAAGGATGGAAATAAAGATAGTGGCAACAATAATATCGCCGCCGAAACTTTTACCTTCCGGGAATTAGCCGCTGCCACAAAGAACTTTAGACAAGAATGCCTCATAGGAGAAGGTGGATTTGGAAGAGTTTATAAAGGAAAGCTTGAAAAAACCAACCAAATAGTAGCTGTGAAGCAACTAGACAGGAATGGATTGCAAGGAAATAGAGAGTTTCTTGTGGAAGTGTTAATGTTGAGCCTATTGCATCATCAAAATCTAGTGAATCTTATTGGATATTGTGCTGATGGAGATCAAAGGCTATTGGTTTATGAATACATGCCATTGGGATCTCTAGAAGATCATTTACTTGATCTTGAACCACATGAAAGACCACTAGATTGGTttgtgagaatgaaaatagCATTGGGAGCATCCAAAGGGTTGGAATATTTGCATGATAAGGCCAATCCTCCTGTGATCTATAGGGACTTAAAGGCCTCAAACATTTTATTAGACACTGAATTTAATGCCAAACTCTCTGATTTTGGCTTGGCCAAACTTGGCCCCACAGGAGACAAGTCCCATGCACAACCAATATTCAAGGACCCTAATAGATACTTAGAGCTAGCGGATCCCCTTCTTCACAAAAACTTCCCAGTGAGAGCATTCAACCAAGCGGTGGCTATCGCCGCCATGTGCCTCAACGACGAACCGTCTGTCCGACCGTTGATCAGCGACGTAGTCACCGCCCTAACTTTTCTTGGGAGTGACCCCCAGTCCAGTCAACCTTCTTCTACTACTAATTCCCCCGGTGTTTCCTCACCGTTGCCGCAGCCCAAGGAGCCTACCGCCCGGGGGACAACCGGGAAACTTCTCGATAACGAGAGCGCCGATGAGCGCGAACGAGCCGTGGCCGACGCCATAAAATGGGGTTCGGCTTCTAGGCACAATGCAGCTGGAGCACAAAGACCAACTGCTAGTGCAAGTGCTTcttcttaa	1146	0.438	MNCFPCFSCNDKKASQKKPKQVVRTQINANQPQKEALLPQPRSDNQGSKQNEDRLNKDGNKDSGNNNIAAETFTFRELAAATKNFRQECLIGEGGFGRVYKGKLEKTNQIVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLEPHERPLDWFVRMKIALGASKGLEYLHDKANPPVIYRDLKASNILLDTEFNAKLSDFGLAKLGPTGDKSHAQPIFKDPNRYLELADPLLHKNFPVRAFNQAVAIAAMCLNDEPSVRPLISDVVTALTFLGSDPQSSQPSSTTNSPGVSSPLPQPKEPTARGTTGKLLDNESADERERAVADAIKWGSASRHNAAGAQRPTASASASS	381

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto6g0695	381	MobiDBLite	consensus disorder prediction	304	381	-	-
	Sto6g0695	381	MobiDBLite	consensus disorder prediction	304	323	-	-
	Sto6g0695	381	Gene3D	Phosphorylase Kinase; domain 1	55	161	-	-
	Sto6g0695	381	Pfam	Protein kinase domain	87	239	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto6g0695	381	ProSitePatterns	Protein kinases ATP-binding region signature.	91	114	IPR017441	GO:0005524
	Sto6g0695	381	MobiDBLite	consensus disorder prediction	29	66	-	-
	Sto6g0695	381	MobiDBLite	consensus disorder prediction	29	46	-	-
	Sto6g0695	381	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	208	220	IPR008271	GO:0004672\|GO:0006468
	Sto6g0695	381	MobiDBLite	consensus disorder prediction	367	381	-	-
	Sto6g0695	381	SUPERFAMILY	Protein kinase-like (PK-like)	71	319	IPR011009	-
	Sto6g0695	381	ProSiteProfiles	Protein kinase domain profile.	85	346	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto6g0695	381	MobiDBLite	consensus disorder prediction	341	355	-	-
	Sto6g0695	381	SMART	serkin_6	85	303	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto6g0695	381	Gene3D	Transferase(Phosphotransferase) domain 1	162	249	-	-
	Sto6g0695	381	PANTHER	SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED	5	245	-	-
	Sto6g0695	381	PANTHER	SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED	244	366	-	-
	Sto6g0695	381	PANTHER	OS07G0668900 PROTEIN	244	366	-	-
	Sto6g0695	381	PANTHER	OS07G0668900 PROTEIN	5	245	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto6g0695	Sto-Chr6	7277207	7281010	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto6g0695	1	376	Glycoside Hydrolase	AT3G07070	52.262	6.49e-139	400

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-1	Sto6g0695		Pkinase	2e-33	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto6g0695	-		-	qsu:112027027	423.32