Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0667 ATGGTTCTGATTCAACAGGAAGACACAGATGAGCATAATGCGAATTCTCCTCAAGCTGCAACTGCAAAATCatccatcaccaccaccattgCCGATGCCGATGGCTTTGAAACCGCCAGTGACACCGATCTCGCCACCGGCGACGACGATAACGGTGGAGGAGAGGCGCATAAAGAAAAGACAGCATTAGATCAAGCAAACGATGCAAAACTTGAAGGGAATAAACTGTTTGGAGATGGACAGTACGAGGAGGCACTATCACAATATGAACTTGCTTTACAAGTTGCAGCAGACATGGCTTCATCTGTTGAAATACGTTCAATATGTCATGCAAATCGTGCTGTATGCTTTATGAAACTGGGTAAATATGATAGCACAATCAAAGAATGCACAAAAGCAATAGAACTCAATCCTGTGTATGTTAAAGCTATGATAAGAAGAGGAGAGGCTCATGAAAAGCTTGAAAATTATGAGGAAGCCATTGCTGATATGAAAAAGATATTAGAAATTGATCCCTCAAATGATCAAGCCAGGAAAACTATTCGTCGACTGGAGCCTCTGGCTGCAGAAAAgatggaaaagaagaaggaagaaatgaTCGAAAAACTGAAAGATTTGGGCAATTCTGTATTGGGCCGCTTTGGTATGAGCATTGACAACTTCAAAGCTGTTAAAGACCCCAAAACTGGTAATGTTGGAGATCAGAACAATAAAACAAACACTGATGAGGGGTTTGAACATTTTCTTGGGGATCACAGAACTGCATTAACGAAGGTGCACCATATGATTCAAAATGGTCTGAAATCTGGTGGGTTGGGAAGTATGGAAGATTTGAAGCATGAGAAGCGATGA 852 0.3932 MVLIQQEDTDEHNANSPQAATAKSSITTTIADADGFETASDTDLATGDDDNGGGEAHKEKTALDQANDAKLEGNKLFGDGQYEEALSQYELALQVAADMASSVEIRSICHANRAVCFMKLGKYDSTIKECTKAIELNPVYVKAMIRRGEAHEKLENYEEAIADMKKILEIDPSNDQARKTIRRLEPLAAEKMEKKKEEMIEKLKDLGNSVLGRFGMSIDNFKAVKDPKTGNVGDQNNKTNTDEGFEHFLGDHRTALTKVHHMIQNGLKSGGLGSMEDLKHEKR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0667 283 MobiDBLite consensus disorder prediction 1 35 - -
Sto6g0667 283 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 15 230 - -
Sto6g0667 283 MobiDBLite consensus disorder prediction 1 57 - -
Sto6g0667 283 Gene3D Tetratricopeptide repeat domain 28 205 IPR011990 GO:0005515
Sto6g0667 283 Pfam Tetratricopeptide repeat 142 174 IPR013105 -
Sto6g0667 283 Coils Coil 147 167 - -
Sto6g0667 283 SUPERFAMILY TPR-like 64 184 IPR011990 GO:0005515
Sto6g0667 283 ProSiteProfiles TPR repeat profile. 141 174 IPR019734 GO:0005515
Sto6g0667 283 SMART tpr_5 107 140 IPR019734 GO:0005515
Sto6g0667 283 SMART tpr_5 66 99 IPR019734 GO:0005515
Sto6g0667 283 SMART tpr_5 141 174 IPR019734 GO:0005515
Sto6g0667 283 Pfam Tetratricopeptide repeat 109 138 IPR001440 GO:0005515
Sto6g0667 283 Coils Coil 189 209 - -
Sto6g0667 283 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 15 230 - -
Sto6g0667 283 ProSiteProfiles TPR repeat region circular profile. 141 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0667 Sto-Chr6 7035159 7038247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0667 41 184 Calmodulin-binding Proteins AT3G25230 34.211 6.93e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0667 K24926 - gmx:100808386 291.582