Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0665 atgGCTCTCCCCAAGCTTTTCTCTCTCTACATTCtcatctccttcttcttctccagctACACTAAATCTCTCTCTtcatctccatctccatctccttcttcttcctctaccTCTTTTGATATTGATCTTCTCTTGGGAAAAATCAAAGCATCCCTGCAAGGTAACGCTGAGAATATCGTTCTCTCTTCTTGGAACTCCTCTGTACCGCTTTGTCAGTGGAGAGGCCTCAAATGGGTCTTCTCCAATGGCTCTTCTCTCTCATGTCCCAACTTTTCCTCACCCCATTGGAACAATCTTTCACTCTATAAGCATCCTCAGCTTCTTTTGCTCTCTCTTCAACTTCCTTCCGCTAATCTCACTGGTTCGATACCTAGAGAGATTTCTGAGTTTTCCATGCTTCAAAGCCTCTATCTCAACGTTAATTCCTTGACAGGAACAATCCCTTTTGAACTTGGTTATAGTTCATCCCTCTCTGAAATCGATTTAGGTGAAAATTTTCTTGGTGGTACTTTACCCCCATCGATTTGGAACTTGTGTGATAAGCTTGTTTCCTTTAGACTCCATGGAAATTCGCTTTCTGGGTCTGTTCCAGAACCGGCATTGCCGGATTATTCTTGTGAGAATTTGCGATTTCTCGATTTGGGTAAGAACAATTTTTCTGGGGAGTTTCCAGAATTCATTACTGGTTTTGGTGGGTTGAAACAGCTTGATTTGGGGGATAACATGTTTGTGGGTCCGATTCCTCAGAGCTTAGCGGGGCTAAGGCTTGAGAAATTGAACCTTTCCCACAACAACTTCAGTGGGGTTTTGCCTACTTTTGAAGAATCCAAATTTGGTTTGGAGGTTTTTGAAGGGAATAATCCAAGCTTGTGTGGGCCACCATTGAGAAGTTGTAGTGGAAATTCTAACTCTAGACTAAGTTCTGGTGCAATTGCTGGTATAGTTATCAGCCTAATGGCTGGAAGTGTGGTTTTAGCTTCTTTGTTAATTGGGTATGTGCAAcacaagaagaggaagaagggtcGGGGAGAGAGTGATAATgaattggaagaagaagaagaagattatgaagatgaagaaaatggtGAGAATaacaatggtggtggtggtggtgagggCAAGCTTATGCAGTTCCAAGGGAGCGAAAATTTGACGTTAGACGATGTGCTGAATGCAACTGGGCAAGTTATGGAGAAGACATGTTATGGGACAGTGTATAAGGCAAAGCTTGGTGATGGAGGAGGGACTATTGCTTTGAGATTGTTGAGAGATGGTTGCTGCAAGGATAGGGCTTCAAGCTTGCCATTTATAAAGCAATTGGGGAAAATTCGTCATGAGAATTTGATTCCTTTGAGAGCTTTCTATCAAGGGAAGAGAGGGGAGAAGCTGCTTATCTATGATTTTCTACCTCTCAGGACCCTTCATGATCTCCTACATGAAACTAAAGCAGGAAAACCGGTGCTGAACTGGTCAAGGCGACACAAGATCGCTTTGGGCATAGCCAGAGGGCTTGCATATCTTCATACAGGACTTGATGCTCCAATTACACATGGGAATCTAAGATCCAAAAACGTGCTTGtggatgatttttttgtttcaagGCTCTCCGAGTTCGGGCTTGATAAGCTAATGAATCCAACCGTAGCCGATGAAATGGTGGCACTTGCTAAGAGTGAAGGCTACAAGGCACCAGAGCTTCAAAGGATGAAGAAATGTAACTCAAGAACTGATGTTTATGCATTTGGCATATTGCTGTTGGAGATTTTGATCGGAAAGAAACCGGGAAAAAATGGCAGAGGTGGTGTTGAATATGTGGATTTGCCTTCAATGGTGAAAGTGGCAGTTTTGGAGGAGACGACAATGGAAGTGTTTGATGTGGAGATTTTGAAAGGGATAAGGAATCCCATGGAAGATGGGTTGGTTCAGGCTTTGAAGTTAGCAATGGGTTGCTGTGCCCCAGTGGCTTCAGTTAGACCCACCATGGATGAAGTTGTGAGACAGTTGGAGGAAAACAGACCAAGAAACAGGTCTGCTTTATACAGCCCTACAGAAACAAGAAGTGGAAGTGGTACTCCTTTTTGA 2082 0.3967 MALPKLFSLYILISFFFSSYTKSLSSSPSPSPSSSSTSFDIDLLLGKIKASLQGNAENIVLSSWNSSVPLCQWRGLKWVFSNGSSLSCPNFSSPHWNNLSLYKHPQLLLLSLQLPSANLTGSIPREISEFSMLQSLYLNVNSLTGTIPFELGYSSSLSEIDLGENFLGGTLPPSIWNLCDKLVSFRLHGNSLSGSVPEPALPDYSCENLRFLDLGKNNFSGEFPEFITGFGGLKQLDLGDNMFVGPIPQSLAGLRLEKLNLSHNNFSGVLPTFEESKFGLEVFEGNNPSLCGPPLRSCSGNSNSRLSSGAIAGIVISLMAGSVVLASLLIGYVQHKKRKKGRGESDNELEEEEEDYEDEENGENNNGGGGGEGKLMQFQGSENLTLDDVLNATGQVMEKTCYGTVYKAKLGDGGGTIALRLLRDGCCKDRASSLPFIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDFLPLRTLHDLLHETKAGKPVLNWSRRHKIALGIARGLAYLHTGLDAPITHGNLRSKNVLVDDFFVSRLSEFGLDKLMNPTVADEMVALAKSEGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKNGRGGVEYVDLPSMVKVAVLEETTMEVFDVEILKGIRNPMEDGLVQALKLAMGCCAPVASVRPTMDEVVRQLEENRPRNRSALYSPTETRSGSGTPF 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0665 693 Gene3D Ribonuclease Inhibitor 42 202 IPR032675 -
Sto6g0665 693 Gene3D Ribonuclease Inhibitor 204 302 IPR032675 -
Sto6g0665 693 MobiDBLite consensus disorder prediction 347 362 - -
Sto6g0665 693 SUPERFAMILY Protein kinase-like (PK-like) 399 674 IPR011009 -
Sto6g0665 693 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 2 693 - -
Sto6g0665 693 MobiDBLite consensus disorder prediction 672 693 - -
Sto6g0665 693 Gene3D Transferase(Phosphotransferase) domain 1 471 681 - -
Sto6g0665 693 MobiDBLite consensus disorder prediction 674 693 - -
Sto6g0665 693 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 2 693 - -
Sto6g0665 693 Pfam Leucine rich repeat 208 266 IPR001611 GO:0005515
Sto6g0665 693 Gene3D Phosphorylase Kinase; domain 1 372 468 - -
Sto6g0665 693 MobiDBLite consensus disorder prediction 340 374 - -
Sto6g0665 693 Coils Coil 342 366 - -
Sto6g0665 693 SUPERFAMILY L domain-like 71 294 - -
Sto6g0665 693 Pfam Protein tyrosine and serine/threonine kinase 395 668 IPR001245 GO:0004672|GO:0006468
Sto6g0665 693 ProSiteProfiles Protein kinase domain profile. 391 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0665 Sto-Chr6 7010159 7012607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0665 33 693 Receptor kinase-like Gene Family AT3G24660 71.861 0.0 899
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto6g0665 PK_Tyr_Ser-Thr 3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0665 - - jre:109006053 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0665 6 7010159 7012607 Sto6g0665 6 7010159 7012607 ECH