Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0663 ATGTTGTCTGGGGAGATTCCTCCTGAAATAGGGAATTGTTCTGAGCTTGTGAACTTATTTTTGTATGAGAATGATCTGTTTGGTTCAATACCCAAAGAACTAGGTAAGCTTCAGAAGCTTGAGAAAATGTTGCTATGGCAGAATAACTTTGTTGGAAGCATACCTCAGGAAATTGGAAACTGTGGGAACTTGATAATATTTGATGTCTCTTTAAACTCCTTGTCTGGAACCATACCTATGACTTTTGGGAACCTATCAAATCTTGAAGAGCTTATGTTGAGTAATAATAACATATCTGGTTCAATCCCACCTGTTGTTTCCAATCTTTCAAACCTCATACAGCTTCAGGTAGATACTAATGAGATATCAGGTTCAATCCCGGCTTCGCTCGGGAAGTTGAAGAAGCTTACTGTCTTTTTTGCTTGGCAGAATAAGCTTGAAGGAAGCATTCCTTCTGAATTGGGTGGTTGTACAAGCCTAGAAGCAATAGATTTGTCTTATAATACACTCAGTGGAAGCTTACCTCCAGGATTGTTTCAGCTTCAGAATTTGACAAAGCTTTTGCTAATCTCTAACCATATTTCGGGTCCACTTCCTCAGGAGATTGGTAATTGCAGTTCTCTAATTCGTCTTCGACTTTTAAACAACAGAATTGGAGGAGAGGTACCGAGAGAACTTGGTTTTCTCAATAACCTAAACTTCCTTGATTTGTCTGAGAACAATCTAACCGGGTCACTACCCGTTGAGCTTGGAAATTGCAAAGAGCTGCAAATGCTGAACCTTAGCAATAATTCCCTTTCGGGTGATTTGCCTAGCTCTTTGTCTTCTCTCACAAGGCTTGAGGTTTTAGATGTTTCTGTGAATCACTTTTCTGGTGAAATTCCAATGAGTATTGGCCAACTCACTTCACTTCTTAGGCTCATCCTCAGTGAAAACTCGTTCTCTGGATCAATACCCACATCACTTGGCCTTTGTTCGGGTCTTCAATTGCTAGACCTCAGTAGCAACAACTTATCAGGAAGTATCCCATCACAACTGTTTGAAATAGAAGCACTTGACATTGCTCTAAATTTGAGTCACAATGCATTATCTGGAGTAGTCCCACCTCAGATTTCTTCTTTGAACAAGCTTTCGGTTCTAGACCTTTCGCACAACATGCTTGAAGGCGACTTGGTGGCATTTTCGGGACTCGAAAATCTTGTTTCTCTCAACATCTCCTACAACAAGTTCACCGGTTATCTGCCGGACATCAAGTTGTTCCACCAATTATCATCTACAGATTTGGAAGGTAATCAAGGGTTATGTCCTAATGGTCATGATTCATGCTTCATAAGCAGTTCTGCAATGTCAAAAATGCTAAGTAATGTCCTAAAATGTCTGGTTGACTCCAATGTAATAGGAAAGGGATGTTCTGGGGTAGTTTATCGCGCAGAAATGGAGAATGGGGATGTCATTGCTGTGAAAAAGCTATGGCCAACAACAATTGCTTCCAGATATGACTGTCAAAATGACAAGCCAACGGTTCGTGATTCCTTTTCGGCCGAGGTCAAAACCCTCGGTTCCATTCGGCACAAGAACATTGTGAGGTTCCTAGGTTGCTGTTGGAATCGAAATACCAAGTTGCTCATGTATGACTACATGCCAAATGGGAGCCTAGGAAGTCTGCTTCATGAACGAAGCGGCGGAAACTGCTTGGAGTGGGACATCAGGTATCGGATTTTGCTCGGTGCTGCTCAAGGCTTGGCTTATCTTCACCATGACTGTGTTCCTCCCATTGTTCATAGGGACATTAAGGCCAACAATATTCTCATAGGACCTGAATTTGAATCATACATTGCTGATTTCGGACTTGCCAAGCTTGTTGATGATGGTGATTTTGCTAGATCCTCAAGCACTCTTGCTGGTTCCTATGGCTACATTGCTCCTGAATATGGATACATGATGAAGATAACAGAGAAAAGTGATGTGTACAGTTATGGCATAGTGGTGTTAGAAGTACTTACAGGGAAGCAGCCAATAGACCCAACAATACCAGATGGGCTCCACATTGTGGATTGGGTGAGACACAAGAGAGGAGGAACCCAAGTTTTAGACCCAAGCCTGTGTGCTAGGCCTGAGCCTGAAATTGAAGAGATATTGCAAACTTTAGGAGTTGCTTTGCTCTGTGTGAACCCTAGCCCAGAGGATAGGCCCACCATGAAAGATGTGGCTGCAATGCTCAAAGAGATTAGGCAGGAGAGGGAGGAATACATGAAAGTGGACATGCTTCTTCATAACCATGGATCTTCTGCAACAAATGAACAAGattcaAGTGAAGAAGGGTCAAGAGGGAAGATGATGAAACAATCATACCCTATAAGCAGCAGTAGTAGCAACACTAATTTTTCTGCTTCTCTTTTGATTTCTCCTTCATCTTCCAATACTAAAGTGACATTGAAATAG 2442 0.4189 MLSGEIPPEIGNCSELVNLFLYENDLFGSIPKELGKLQKLEKMLLWQNNFVGSIPQEIGNCGNLIIFDVSLNSLSGTIPMTFGNLSNLEELMLSNNNISGSIPPVVSNLSNLIQLQVDTNEISGSIPASLGKLKKLTVFFAWQNKLEGSIPSELGGCTSLEAIDLSYNTLSGSLPPGLFQLQNLTKLLLISNHISGPLPQEIGNCSSLIRLRLLNNRIGGEVPRELGFLNNLNFLDLSENNLTGSLPVELGNCKELQMLNLSNNSLSGDLPSSLSSLTRLEVLDVSVNHFSGEIPMSIGQLTSLLRLILSENSFSGSIPTSLGLCSGLQLLDLSSNNLSGSIPSQLFEIEALDIALNLSHNALSGVVPPQISSLNKLSVLDLSHNMLEGDLVAFSGLENLVSLNISYNKFTGYLPDIKLFHQLSSTDLEGNQGLCPNGHDSCFISSSAMSKMLSNVLKCLVDSNVIGKGCSGVVYRAEMENGDVIAVKKLWPTTIASRYDCQNDKPTVRDSFSAEVKTLGSIRHKNIVRFLGCCWNRNTKLLMYDYMPNGSLGSLLHERSGGNCLEWDIRYRILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFESYIADFGLAKLVDDGDFARSSSTLAGSYGYIAPEYGYMMKITEKSDVYSYGIVVLEVLTGKQPIDPTIPDGLHIVDWVRHKRGGTQVLDPSLCARPEPEIEEILQTLGVALLCVNPSPEDRPTMKDVAAMLKEIRQEREEYMKVDMLLHNHGSSATNEQDSSEEGSRGKMMKQSYPISSSSSNTNFSASLLISPSSSNTKVTLK 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0663 813 MobiDBLite consensus disorder prediction 781 813 - -
Sto6g0663 813 PRINTS Leucine-rich repeat signature 328 341 - -
Sto6g0663 813 PRINTS Leucine-rich repeat signature 374 387 - -
Sto6g0663 813 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 453 - -
Sto6g0663 813 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 454 765 - -
Sto6g0663 813 Gene3D Phosphorylase Kinase; domain 1 446 546 - -
Sto6g0663 813 Coils Coil 733 753 - -
Sto6g0663 813 ProSiteProfiles Leucine-rich repeat profile. 87 109 IPR001611 GO:0005515
Sto6g0663 813 Gene3D Transferase(Phosphotransferase) domain 1 547 764 - -
Sto6g0663 813 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RCH1 1 453 - -
Sto6g0663 813 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RCH1 454 765 - -
Sto6g0663 813 ProSiteProfiles Protein kinase domain profile. 460 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0663 813 SMART LRR_sd22_2 85 111 - -
Sto6g0663 813 SMART LRR_sd22_2 133 165 - -
Sto6g0663 813 SMART LRR_sd22_2 374 399 - -
Sto6g0663 813 Pfam Protein tyrosine and serine/threonine kinase 464 739 IPR001245 GO:0004672|GO:0006468
Sto6g0663 813 MobiDBLite consensus disorder prediction 759 813 - -
Sto6g0663 813 Gene3D Ribonuclease Inhibitor 270 354 IPR032675 -
Sto6g0663 813 Gene3D Ribonuclease Inhibitor 355 442 IPR032675 -
Sto6g0663 813 ProSitePatterns Protein kinases ATP-binding region signature. 466 489 IPR017441 GO:0005524
Sto6g0663 813 SUPERFAMILY Protein kinase-like (PK-like) 451 740 IPR011009 -
Sto6g0663 813 Gene3D Ribonuclease Inhibitor 80 173 IPR032675 -
Sto6g0663 813 Gene3D Ribonuclease Inhibitor 1 79 IPR032675 -
Sto6g0663 813 Gene3D Ribonuclease Inhibitor 174 269 IPR032675 -
Sto6g0663 813 SMART LRR_typ_2 301 325 IPR003591 -
Sto6g0663 813 SMART LRR_typ_2 37 61 IPR003591 -
Sto6g0663 813 SMART LRR_typ_2 374 396 IPR003591 -
Sto6g0663 813 SMART LRR_typ_2 229 253 IPR003591 -
Sto6g0663 813 SMART LRR_typ_2 326 349 IPR003591 -
Sto6g0663 813 SMART LRR_typ_2 157 181 IPR003591 -
Sto6g0663 813 SMART LRR_typ_2 85 109 IPR003591 -
Sto6g0663 813 SMART LRR_typ_2 397 419 IPR003591 -
Sto6g0663 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672|GO:0006468
Sto6g0663 813 SUPERFAMILY L domain-like 271 436 - -
Sto6g0663 813 SUPERFAMILY RNI-like 3 315 - -
Sto6g0663 813 SMART serkin_6 460 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0663 Sto-Chr6 6996640 7000031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0663 1 756 Receptor kinase-like Gene Family AT5G56040 48.592 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto6g0663 PK_Tyr_Ser-Thr 2.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0663 - - gmx:100794698 1089.33