Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0659 ATGGAGGAAGCAAACGCTCTGGACAGAGATATGTGGCTTGAAGATCATCATCAAGATCAAGACGACCTTCTGGGTGTCGTCAACCATGATGCTTCCATGTTCTATGCCGATTTCCCTCCTCTCCCAGATTTCCCATGCATgtcttcgtcttcctcctcttcctccactCCCACACTCCCACCACCTGTGAACACCCTCACCTGCTCCACCACCACGGCGGCCaccgccgccaccaccaccacctcgtcgtcgtcctcctcctcctctgtcGCCTCGTGGGCCGTCCTCGACGAGCACGACAACAAGAACAATATTCCGCCGGCGCCGTTGTCCTCCACCGCTTCCATGGAGATCCCGGCCCCGCCACCGCCATCCGccgcctccgccgccgccgagATGGATGCAATGATGGAGCCGTTTCCCTACATGGACATGCTGGAGATCAACGATTTCTTCGTCGACCCGGCGGGCGGGTTGATGTTCCAAGACGAGGATAATTACGTGTTTGAGGAATTGTCGGGACATGATCATCAGAATCCGAATCTGAATCAGAATCTTGGACCGGAGGAGCTTCAGGTGACGGACAATAATATTCAGGATCACGAGCTTGTGAGTTgtggtaataataataataatattgctaTGAATTATGATGAGACTAATGTTGTGACAAATAATGAGCAAGAAaaagttggtggtggtggcggcggcggcggcggcggcggtggtgatTGTGAAATGAGCGATGTGTTCTTGGAGTGGCTGAAGATGAACAAAGACAGTGTTTCGGCGAGTGATCTGAGGAATGTGAAGTTGAAGAAAGCCACAATTGAATGTGCTGCGAGGCGTTTGGGAGGTGGGAAAGAAGCCATGAAGCAATTGTTGAAGCTCATTCTTGAATGGGTTCAAACCAGCCATCTTCAGAACAAGAGGCGCAATAATAGTATTACTCTCaataaggaaaataataataatattgacaatagtactactaataataatactaatactgTGCCTTCTTCCAATTTTGttacaaaccctaaccccaattcCAACCCAAATTCTTCATTTGGAGGACAACAATGGGTTTCTCCTCCGGTGCAACCGGTTCCGTATGGGGTGGATCAGACGGGTATGATGGCGGCTGTGACGCCGGGGGCTTTTCCGGTGATTGGGTACCCGGGTGACCCGTATTCCAGTAGTACTATTAGTCCTTATAATAACATGTTGGAGTCAGCTAATTCATGGCCTCATTCTCAGTTTACTATTGCTCCGGCGCCGGGCCATTACAACCCGTCATTCGGTGGGGACAATAATCTACActgtcctcctcctcctcctcctccaccagTGGCCGGGCCGGCTGGGTTTGGTGGATATGGAAGTCAATATCCATATCAATATTTTCATGGCCTGGCGACCGGGACCGGGGCAACGGCTGTGGCGGCTGGTGATAATAATAAGATGATGAGATTGGGCCCCTCGGCGACAAAAGaggcgaggaagaagaggatgGCGAGGCAAAGGAGGTCTTTGTCTCATCATAGGAGCCAAAAACATCATGGCCAGATGCAGAATCAAAGTAATGATCATCATCAGATTCATGATTCACTGGCAAGATTGGGAAGTGATCTTAATTGCACCGCGGGTGCCGGCGCTGTAAACCCGGCGAATTGGGTGTATTGGGCTTCAATGCCCGGTGGCACAACTTCCGTGGGACCCGTGATTCCGCCTGAATCTCGGGCGGTGGATCGAGATCCAACGGCTATGCAAACACAGAATTCTCATCAAGGCACTAAAGTTTCATCAACGGATCAAAAGCGACCGggATGGAAGCCAGAGAAGAACTTGAGGTTTCTTCTACAGAAAGTGTTGAAGCAAAGTGATGTTGGCAGTTTAGGAAGAATTGTGTTACCAAAAAAAGAGGCAGAAATCCATTTGCCAGAACTGGAAGCAAGAGATGGGATTTCCATAGCAATTGAAGACATTGGAATTTCTCGAGATTTTGTGAAAGCTAATGGACTCCAAGAGGGAGACTTCATAGTGTTATACTCAGATATGAAGTGCGGCAAATATatgaTAAGAGGAGTTAAAGTAAGGCCAGGTGTAACGACGACGACTGGGACGAAACTGGAGAGCAAGAAAACTTCCAAAACGCAGAAAAACGCAGTTTCTAATGCTCCCATTGATTCACCCTCATCACCATCTTCATCCCTCATTTCTGATCTTCCTCCTCTCAAGAAACTCAGAAAATGA 2256 0.4202 MEEANALDRDMWLEDHHQDQDDLLGVVNHDASMFYADFPPLPDFPCMSSSSSSSSTPTLPPPVNTLTCSTTTAATAATTTTSSSSSSSSVASWAVLDEHDNKNNIPPAPLSSTASMEIPAPPPPSAASAAAEMDAMMEPFPYMDMLEINDFFVDPAGGLMFQDEDNYVFEELSGHDHQNPNLNQNLGPEELQVTDNNIQDHELVSCGNNNNNIAMNYDETNVVTNNEQEKVGGGGGGGGGGGGDCEMSDVFLEWLKMNKDSVSASDLRNVKLKKATIECAARRLGGGKEAMKQLLKLILEWVQTSHLQNKRRNNSITLNKENNNNIDNSTTNNNTNTVPSSNFVTNPNPNSNPNSSFGGQQWVSPPVQPVPYGVDQTGMMAAVTPGAFPVIGYPGDPYSSSTISPYNNMLESANSWPHSQFTIAPAPGHYNPSFGGDNNLHCPPPPPPPPVAGPAGFGGYGSQYPYQYFHGLATGTGATAVAAGDNNKMMRLGPSATKEARKKRMARQRRSLSHHRSQKHHGQMQNQSNDHHQIHDSLARLGSDLNCTAGAGAVNPANWVYWASMPGGTTSVGPVIPPESRAVDRDPTAMQTQNSHQGTKVSSTDQKRPGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAEIHLPELEARDGISIAIEDIGISRDFVKANGLQEGDFIVLYSDMKCGKYMIRGVKVRPGVTTTTGTKLESKKTSKTQKNAVSNAPIDSPSSPSSSLISDLPPLKKLRK 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0659 751 MobiDBLite consensus disorder prediction 312 364 - -
Sto6g0659 751 SUPERFAMILY DNA-binding pseudobarrel domain 620 691 IPR015300 -
Sto6g0659 751 MobiDBLite consensus disorder prediction 585 612 - -
Sto6g0659 751 MobiDBLite consensus disorder prediction 586 606 - -
Sto6g0659 751 MobiDBLite consensus disorder prediction 502 521 - -
Sto6g0659 751 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 8 734 - -
Sto6g0659 751 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 8 734 IPR044800 GO:0003700
Sto6g0659 751 SMART B3_2 621 700 IPR003340 GO:0003677
Sto6g0659 751 MobiDBLite consensus disorder prediction 312 363 - -
Sto6g0659 751 MobiDBLite consensus disorder prediction 489 530 - -
Sto6g0659 751 MobiDBLite consensus disorder prediction 704 741 - -
Sto6g0659 751 Gene3D - 612 667 IPR015300 -
Sto6g0659 751 MobiDBLite consensus disorder prediction 704 751 - -
Sto6g0659 751 MobiDBLite consensus disorder prediction 98 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0659 Sto-Chr6 6946863 6950841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0659 1 728 B3 DNA Binding Superfamily AT3G24650 40.025 2.28e-121 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0659 - - gmx:100810343 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0659 6 6946863 6950841 Sto6g0659 6 6946863 6950841 ECH