Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0654 ATGGTTTTTTCTTCAATCCCAGCTTATCTTGATCCAGCCAACTGGCATCAACagAATAGTAGTGGaagtgttggtggtggtggcccTAGTTCTCAGCTTCTtccaccaccgccaccgccgCCCTCGCTGACACCACCTCCACAATCATCCCATGGTCCCACGGGCTCGACGGGCTCGATCCGGCCCGGTTCCATGGCGGACCGGGCCCGGATGGCGAACATACCGATGCCGGAGGCGGCGTTGAAATGTCCACGGTGTGACTCCACCAACACTAAATTTTGTTACTTCAACAACTACAGCCTCTCTCAGCCTCGCCACTTTTGCAAGACCTGCCGGCGGTACTGGACCCGGGGCGGCGCCTTGCGTAACGTCCCCGTCGGCGGCGGATGCCGGAGGAACAAGAGGAGTAAAGGTGGTGGTGGTAGTAGCAGTAGTTCGAGGTCTCCGCCGCCCGTGAGCTCTGATCGCCGGACCGGCGGAAGCACTAGCTCCACAAATTCCGTCTCTTCTAATGACATGATAGGAGGCCTCACCTCTCATCAGGTTCCTCCTCCGCCTCTACGGTTCATGGCTCCATTACATCATCAATTGTCTGAGTTTGGAACCGGAGGGGAGATAATGGGCTTGAACTATGGTGGGCCGCTGAGTAATTATAGCTCAATTTCAGGCCCAATGGGAGGAGGTGACTTAAATTTCCATATAGGAACCGCTTTAGGCGGTGGCGGCGCGTCAATCTTATCGGCGGCCGGGTTGGAGCAATGGCGGCTACCGCCGCCGTCGCAGCAGCAATTTCCCTTCTTGGGTGGCTTGGAAGGTTCACCAAGTGGATTGTACGGTTTCGAGGCGGCGGCCGACGTGGCGGGATACGGCGGCAGCGGGGCGCGGGCAAAGGTGTCGACTTCCGGGGTGATAACGCAATTAGCTTCGGTGAAAATGGAAGATAATAAtcatggaggaggaggaggtggagTGAATTTGTCAAGGCAGTTCTTGGGGATAAATAATATAGCAACAAATCATGAACCTAATTGGACTGATCTTTCTGGGTTTAGCTCTTCTTCTACTACTAGCAATCCactatag 1083 0.5097 MVFSSIPAYLDPANWHQQNSSGSVGGGGPSSQLLPPPPPPPSLTPPPQSSHGPTGSTGSIRPGSMADRARMANIPMPEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGGGGSSSSSRSPPPVSSDRRTGGSTSSTNSVSSNDMIGGLTSHQVPPPPLRFMAPLHHQLSEFGTGGEIMGLNYGGPLSNYSSISGPMGGGDLNFHIGTALGGGGASILSAAGLEQWRLPPPSQQQFPFLGGLEGSPSGLYGFEAAADVAGYGGSGARAKVSTSGVITQLASVKMEDNNHGGGGGGVNLSRQFLGINNIATNHEPNWTDLSGFSSSSTTSNPL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0654 360 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 6 356 - -
Sto6g0654 360 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 6 356 IPR045174 GO:0003700|GO:0006355
Sto6g0654 360 MobiDBLite consensus disorder prediction 137 177 - -
Sto6g0654 360 MobiDBLite consensus disorder prediction 122 184 - -
Sto6g0654 360 MobiDBLite consensus disorder prediction 14 64 - -
Sto6g0654 360 Pfam Dof domain, zinc finger 80 135 IPR003851 GO:0003677|GO:0006355
Sto6g0654 360 ProSitePatterns Zinc finger Dof-type signature. 83 119 IPR003851 GO:0003677|GO:0006355
Sto6g0654 360 MobiDBLite consensus disorder prediction 14 28 - -
Sto6g0654 360 ProSiteProfiles Zinc finger Dof-type profile. 81 135 IPR003851 GO:0003677|GO:0006355
Sto6g0654 360 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0654 Sto-Chr6 6917005 6918474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0654 1 353 C2C2-Dof Transcription Factor Family AT2G37590 39.678 7.11e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sto6g0654 zf-Dof 1.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0654 - - gmx:100796820 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0654 6 6917005 6918474 Sto1g2415 1 31860558 31861927 CCT
Sto6g0654 6 6917005 6918474 Sto6g0654 6 6917005 6918474 ECH