Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0645 ATGGCTAATCCTCGCCTTCGCTATCTACTACGGTGGCGCAAGTGGGCCAACAAGGATTGGGCGATCGCGGCCGTCGCCTTCACCGTCGTCATCTTCTTCGCGTTTTCTCTCTTCTCCGACTCCCCCCGGCGCACCGTGGATGCTTCCCAAGTCCACCCTTCTTTGGGTCAGAACTATGAGAAAGATCTCGTCGATTTGACTCTTCTGCGAAATGCTAGGGATAGAGGCGCTTTTTGTTTGGATGGGAGCTTACCAGGATACCATTTCCAAAAGGGGTTTGGATCTGGCTTAAACAGCTGGCTGCTTCACATTGAGGGAGGGGGTTGGTGCAATTCCATTTCTTCATGTTCTCTGCGTAAAATGACTGCTTTAGGATCCTCCAAGTATATGGATAGACAAGTTCGTTTTTCAGGAATATTGAGCTCTGACCCTGCTCAGAATCCTGATTTCTTTAACTGGAACAAGGTCAAGATACGTTATTGTGATGGTGCATCTCTTGCTGGCCACCCAGAAAATGAGATCAAGaaagggagtaaattatTCTTCAGAGGCCAGCTCATATGGGAAGCACTCATGGACGAGCTCTCGTCAATTGGCTTGTCTAAAGCAAAACAGGCTCTGCTCTCAGGATGCTCTGCTGGAGGATTGGCAACTCTTATACATTGTGATAACTTTCGAGAACTTCTTCCAAAGGAAGCAACTGTTAAGTGTCTTGCTGATGCAGGCTTTTTCCTAGATGAGAAGGATATTATTGGCAATTCTACTATGAGATTGTTTTATCATGATGTTGTCCAGCTTCAGAGTGTTGCGAAAAGCTTGGACAGTGATTGCATTTCTAGCATGGAACCATCTAGGTGTCTCTTTCCGGCAGAAATTATTAAAAGGTTAAAGACACCTGTGTTCCTTGTCCACCCAGCTTATGATTTCTGGCAGATACAAAATATCTTGGTACCAGGTGGATCGGATCCTCATGGCCACTGGAAAAGGTGCAGATTGAGCATTCGTAATTGTCATGCTGATGATCTAATGAGTACACTTCAAGGTTTCCGGAGTTCTTTGCTGAAATCAGTGAATGAATTCCAGCAACGAAAGGAAATGGGACTGTTTATAAATTCCTGCTTTATTCATTGCCAGACTTGGATGGCAGAGACATGGCATTCAGCCAATTCGCCTAAAATAAACGATAAGACAATAGCTGAATCTGTTGCTGACTGGTTCTTTGAGAGAAAAGTGGTGAAGCAAATTGACTGCCCTTATCCATGCAACCCCACTTGCCATAATATGGATTTCAGCATAGTATAA 1302 0.4432 MANPRLRYLLRWRKWANKDWAIAAVAFTVVIFFAFSLFSDSPRRTVDASQVHPSLGQNYEKDLVDLTLLRNARDRGAFCLDGSLPGYHFQKGFGSGLNSWLLHIEGGGWCNSISSCSLRKMTALGSSKYMDRQVRFSGILSSDPAQNPDFFNWNKVKIRYCDGASLAGHPENEIKKGSKLFFRGQLIWEALMDELSSIGLSKAKQALLSGCSAGGLATLIHCDNFRELLPKEATVKCLADAGFFLDEKDIIGNSTMRLFYHDVVQLQSVAKSLDSDCISSMEPSRCLFPAEIIKRLKTPVFLVHPAYDFWQIQNILVPGGSDPHGHWKRCRLSIRNCHADDLMSTLQGFRSSLLKSVNEFQQRKEMGLFINSCFIHCQTWMAETWHSANSPKINDKTIAESVADWFFERKVVKQIDCPYPCNPTCHNMDFSIV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0645 433 Pfam Pectinacetylesterase 59 411 IPR004963 GO:0016787
Sto6g0645 433 PANTHER PECTIN ACETYLESTERASE 4 13 426 - -
Sto6g0645 433 PANTHER NOTUM-RELATED 13 426 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0645 Sto-Chr6 6808451 6812902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0645 1 397 Carbohydrate Esterase AT3G09410 57.179 3.31e-179 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0645 K19882 - qsu:111992987 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0645 6 6808451 6812902 Sto6g0645 6 6808451 6812902 ECH