Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0643 ATGGGTAACCGTATCGGAAAAGTTTGCCTCTGCTCCTCCGGCGCCGGAGAACTCTCCCGCCGGTACGACAAGTTCGCCTTCCCCACCACCTCCGGCCAATCTCTCGGCAACTCAATCTGCTACAACCGACCCGACCCGTTTTGCTCTTCGTCTTGCTCAAATATCTTCTCCGACGACGACGATGCCGCCACCCAGATGACTTTCCGATCAATCTCCGGTGCCTCCGTGAGCGCCAACTCCTCCACCCCACCTTCCATTTCTCTCACCGATTCTTTCCAACATGTAAGCTCTGTTTTGGACTCTACGGCGTCGTTTGAGTCCTCCACTTCCTTCACCTCCACGCCCcttcatcctcctcctcctccgccgCCGCCACGTGGCTCCTCCGTGGGAAGCTCCGGGACGGTGTCGGGTCCCATGGACGGACGGTTTTCCTTGTCGGGTTCGGACCCAATCGTGGGGTTTGACCCGAAATTGAATTGGAACTCCATTGAAGAAGAGAAAAGCTCTGAATCTGTGAATTTCAAACGAAGCTTATCGGATAACCGAAATGGGGTTTCGATTAAACCCAATAATAGTCTGAAGAAGATTTTCCGGCGAGCGATTTCCAGCGTCACGCCGATCAAAGGTGTGGCTTTGAATTCCACAGGAGAATCCAttccaaagaagaaaaagaagaagaaaaatgatattGACGATCATGTCGAAAACGACGTCGTTGAAACCAATGAAGAAGCCTTAATGGAAAACAAGAATCTTCAGTGGGCACAAGGAAGAGCAGGGGAAGACCGAATCCACATCGTAATCTCCGAGGATTACGGTTGGGTTTTCGTGGGAATCTATGATGGATTCAACGGCCCAGATGCCACCGATTACCTCCTCAACAATCTCTTCAACTGTATTCATAATGAGGTGAAGGAGCTTCTTCTGTGTAAGAGTAATAATACTAGTAAAGAAGGAGGTGATTTGAGTGAGTGGGGTGTGATGGAGGCACTTTCGGAGGGATTAAGGAAGGCAGAGGAAGAGTTCATGGAGGATTCTGATGAGATAATCACGAAGAATCCTGTGTTAGCAATGATGGGTTCTTGTGTTTTGGTGATGTTAATGAAAGGTGATGATGTTTACTTGATGAATGTGGGAGATAGTAGAGCTGTTTTGGCTCAAACTTCACACTATGATTTGTATTCTCTTCAGCTCACTATGGATCACAGTACTAATGTGAAAGAGGAGGTTCAGAGAATTAGAAGGGAACACCCAGATGATCCTTATGCAATAACTAAAGGCAGAGTGAAAGGTCACTTGAATGTCACAAGGGCTTTTGGAGCTGGGTTTCTTAAGCAGCCTAAACATAACAATGCAGTATTGGAGAGTTTCAGAGTGAAGTACATAGGGGACCAACCATACATCACATGTACTCCTTCACTTCATCACCACAGGCTCACCCCAAGTGATAGATTCTTAATATTGTCCTCTGATGGACTCTTTCAATACTTCACCAATGAAGAAGCTGTCTCCAAAGTAGACTCTTTCATTACTTTGTTTCCTGATAGAGATCCTGCACAACTTCTTGTTCAAGAAGCACTCTTTAGAGCAGCAAAAAAAGCTGGTATGGATTTCTATGAGTTGCTTGATATTCCACAAGGGGAACGTCGTCTATTCCATGATGACATTTCCATTATCATCATCTCTCTACAAGAGGGAAAGTTATGGCGTTCATTACTGtaa 1725 0.4475 MGNRIGKVCLCSSGAGELSRRYDKFAFPTTSGQSLGNSICYNRPDPFCSSSCSNIFSDDDDAATQMTFRSISGASVSANSSTPPSISLTDSFQHVSSVLDSTASFESSTSFTSTPLHPPPPPPPPRGSSVGSSGTVSGPMDGRFSLSGSDPIVGFDPKLNWNSIEEEKSSESVNFKRSLSDNRNGVSIKPNNSLKKIFRRAISSVTPIKGVALNSTGESIPKKKKKKKNDIDDHVENDVVETNEEALMENKNLQWAQGRAGEDRIHIVISEDYGWVFVGIYDGFNGPDATDYLLNNLFNCIHNEVKELLLCKSNNTSKEGGDLSEWGVMEALSEGLRKAEEEFMEDSDEIITKNPVLAMMGSCVLVMLMKGDDVYLMNVGDSRAVLAQTSHYDLYSLQLTMDHSTNVKEEVQRIRREHPDDPYAITKGRVKGHLNVTRAFGAGFLKQPKHNNAVLESFRVKYIGDQPYITCTPSLHHHRLTPSDRFLILSSDGLFQYFTNEEAVSKVDSFITLFPDRDPAQLLVQEALFRAAKKAGMDFYELLDIPQGERRLFHDDISIIIISLQEGKLWRSLL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0643 574 Gene3D - 220 568 IPR036457 -
Sto6g0643 574 ProSiteProfiles PPM-type phosphatase domain profile. 244 564 IPR001932 -
Sto6g0643 574 Coils Coil 329 349 - -
Sto6g0643 574 CDD PP2Cc 260 538 IPR001932 -
Sto6g0643 574 SMART PP2C_4 246 562 IPR001932 -
Sto6g0643 574 PANTHER PROTEIN PHOSPHATASE 2C 313 574 IPR015655 GO:0004722|GO:0006470
Sto6g0643 574 PANTHER PROTEIN PHOSPHATASE 2C 19 307 IPR015655 GO:0004722|GO:0006470
Sto6g0643 574 MobiDBLite consensus disorder prediction 114 128 - -
Sto6g0643 574 MobiDBLite consensus disorder prediction 108 149 - -
Sto6g0643 574 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 313 574 - -
Sto6g0643 574 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 19 307 - -
Sto6g0643 574 SUPERFAMILY PP2C-like 260 565 IPR036457 -
Sto6g0643 574 Pfam Protein phosphatase 2C 274 528 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0643 Sto-Chr6 6792764 6795787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0643 1 574 PP2C-type Phosphatase Gene Family AT1G07630 46.392 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0643 - K01102 gmx:100794388 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0643 6 6792764 6795787 Sto6g0643 6 6792764 6795787 ECH