Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0638 ATGGCTGAGGTGAAATCAGAGGAGTGTTGTCTAGAGAATAAGCAGTCTACTGCTGCTTCTAACTCCTCTGTATCTGAAGGCAGTGCAAGTGCCAGTGCTATACACAAGTCCCCGGGAAGATGTAGCCCAGCATCAACATCACCCTCTCATCGGAGGACTACTGGTCCCATTAGGCGTGCAAAGGGAGGTTGGACAGCACAGGAGGATGAGACATTAAGGAATGCTGTTGCTACTTTTAAAGGAAAAAGTTGGAAAAAAATAGCTGAGTTTTTCCCTGATAGATCAGAAGTACAATGTCTGCACAGATGGCAAAAGGTTCTTAATCCAGAACTTGTTAAAGGACCTTGGACTCAGGAGGAGGATGACAAAATTGTTGAACTCGTGTCAAAATATGGGCCAACAAAATGGTCTTTGATAGCCAAGTCTTTGCCTGGTCGCATAGGGAAACAGTGTCGAGAACGGTGGCACAATCATCTTAATCCTGAAATAAAGAAGGATGCCTGGACTTTGGAGGAGGAATTGGCCCTCATGAATGCTCATCGTATACATGGGAACAAATGGGCTGAAATAGCTAAGGTTTTGCCTGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCATTGAAGAAAAAGTTGGAATTTTATTTAGCCACAGGAAACCTTCCACCAATCCCAAAGAACAGTCCACAAGGCAGTGTGAAAGATACAACTAGACGCTCTGCAACTAAAACAATACTTGTTTGCTCAAATAAAGGATTAGATGGAGCTGCTGAAACATCATCAGAAACTACAGACATTACTAAGAAGGATGACAGTGGAAAGAATCAGTTAGATTCCTCAGCAACAGTGCGAGAGGTGGGTAATTCTCTGAGTATTCCTGCAAATGAATCTGCTGATTCTGACTTTGTGGAACGGAAGCCCAGATCATCCAATATAGATTTCAGCAGCAGCAACTTAGAACCAGTCTCAAGGGATAATTTTGGAATGATCAGTGAGAAAAAGTTTGAGTACGCAGGATTGAATGGCAAGCAAACAATTCAGAATTGTAAGAATAATGTTGAAATGAGTAGTAGCAGGTTAATCAGTACATCTTTTTCACAGGATAGTCCATCATCTGGTTCTTTGTGCTATGAGCCACCACAATTGGAGAGTTCAGTTCCTTTGGATTCCCTTTATTTAAGTATGTGTTGCTTGCAGAATGAGTACATCTCTACTCCAGTGATGTCGCCTATTGGTTTCTTCACTCCACCTTGTGTGAAGGGAAATGAATTATGCACGCAGACTCCTGAGTCAGTATTGAAAATGGCTGCTAAAACTTTCCCATATACTCCTTCCATATTGAGGAAGAGAAGGAATGGAGTCCAAAAGCAGGAAGGAACCAAGGATAGTTCTGGTTCTGGTTCTGAGTGTGGGAAGCTGTGTGAGAGTCCAGCAAGCAACGACGTTCCCAATAATAAGGCTTTCAATGCATCTCCTCCATATCGGTTAAGATACAGGAGGACAACTATTGTCAAGTCTGTAGAGAAACAACTTGAGTTTGCATTTGACAAAGAGAAGCATGATGGCAACACAAAGGAAAAATCTGCAAAGAGGAGCACTACGTTGACTGAAGGGATTAAGGCTGGACTTGCTGTTGAAGATGgattaattttttcaaataaGATCTTGCTGATTTTGCAAAGCTAA 1692 0.4178 MAEVKSEECCLENKQSTAASNSSVSEGSASASAIHKSPGRCSPASTSPSHRRTTGPIRRAKGGWTAQEDETLRNAVATFKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPEIKKDAWTLEEELALMNAHRIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLEFYLATGNLPPIPKNSPQGSVKDTTRRSATKTILVCSNKGLDGAAETSSETTDITKKDDSGKNQLDSSATVREVGNSLSIPANESADSDFVERKPRSSNIDFSSSNLEPVSRDNFGMISEKKFEYAGLNGKQTIQNCKNNVEMSSSRLISTSFSQDSPSSGSLCYEPPQLESSVPLDSLYLSMCCLQNEYISTPVMSPIGFFTPPCVKGNELCTQTPESVLKMAAKTFPYTPSILRKRRNGVQKQEGTKDSSGSGSECGKLCESPASNDVPNNKAFNASPPYRLRYRRTTIVKSVEKQLEFAFDKEKHDGNTKEKSAKRSTTLTEGIKAGLAVEDGLIFSNKILLILQS 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0638 563 ProSiteProfiles Myb-like domain profile. 108 159 IPR001005 -
Sto6g0638 563 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 107 IPR017930 -
Sto6g0638 563 SMART sant 164 212 IPR001005 -
Sto6g0638 563 SMART sant 112 161 IPR001005 -
Sto6g0638 563 SMART sant 60 109 IPR001005 -
Sto6g0638 563 MobiDBLite consensus disorder prediction 11 32 - -
Sto6g0638 563 CDD SANT 64 107 IPR001005 -
Sto6g0638 563 Gene3D - 60 112 - -
Sto6g0638 563 Gene3D - 166 245 - -
Sto6g0638 563 Pfam Myb-like DNA-binding domain 113 159 IPR001005 -
Sto6g0638 563 Pfam Myb-like DNA-binding domain 61 107 IPR001005 -
Sto6g0638 563 Pfam Myb-like DNA-binding domain 165 208 IPR001005 -
Sto6g0638 563 CDD SANT 167 210 IPR001005 -
Sto6g0638 563 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 164 214 IPR017930 -
Sto6g0638 563 SUPERFAMILY Homeodomain-like 62 117 IPR009057 -
Sto6g0638 563 MobiDBLite consensus disorder prediction 278 298 - -
Sto6g0638 563 ProSiteProfiles Myb-like domain profile. 56 107 IPR001005 -
Sto6g0638 563 MobiDBLite consensus disorder prediction 39 53 - -
Sto6g0638 563 MobiDBLite consensus disorder prediction 1 63 - -
Sto6g0638 563 ProSiteProfiles Myb-like domain profile. 160 210 IPR001005 -
Sto6g0638 563 SUPERFAMILY Homeodomain-like 110 206 IPR009057 -
Sto6g0638 563 PANTHER MYB PROTEIN-RELATED 20 480 - -
Sto6g0638 563 PANTHER MYB-RELATED PROTEIN B-LIKE 20 480 - -
Sto6g0638 563 MobiDBLite consensus disorder prediction 256 319 - -
Sto6g0638 563 MobiDBLite consensus disorder prediction 449 493 - -
Sto6g0638 563 CDD SANT 115 159 IPR001005 -
Sto6g0638 563 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 163 IPR017930 -
Sto6g0638 563 Gene3D - 113 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0638 Sto-Chr6 6737831 6743034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0638 51 528 MYB Transcription Factor Family AT5G02320 51.765 1.56e-149 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto6g0638 Myb_DNA-binding 9.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0638 K09422 - gmx:100793280 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0638 6 6737831 6743034 Sto6g0638 6 6737831 6743034 ECH