Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0628 ATGGTGTTGCAGAAGAATTTGAACTATAGTTTCAATGGCTATCAGGTGCCTGTTGTCCCAAGAGCTTCGAGATCAACTAGGGGGAAGGGTACGATCAGGAAGAAAAGTGAGAACAATCAGATACAGGCGTTTGAAATTTTGGCTAGTGTAGCCGGCAACTTTCTGCAGGAGAATGAAAACTCCAATACTGATAACACTGCATCCGGGAAAGAGCCTGTTGATTTTGTTGGAACTGACGTAAAAGATGTACAAGACGAAGAAGCAAGGTTGTATAAGGGGGACCTCTTTGAGCATGGAAGTTGCAGCGAGAATGCCTCTGGCTTTGTCCCGGGTTTGCAAGGGAAGCATAGTGAGCAAAGAGTTGTGGGCTACTCATCATTTCTTGGCAATCATCTTGAAGGCCAAGGACAAAATGTTCTTGAGAGGGAAGAACCAGACCACGGAGCTTCCAAATTGGAAAGTTCAGGAAAATATGTAGAAAAGCCTTCGCTGGAGGAGGGCCTCAGGCATGGTTCTGCTGGTAGGAAATTATTTAATAGAGATGATGACGAAAACTTTATTAGTTGTACTCAACTAAGCTCTAAGAATAAGATCTCTGGCCCACCGCCAGATACATCTTCTCAAAGAGCGAAAAGTGTTTCTGGATCCAAAAACAGCAATGGTTGGGATAATTATGTGCTTGAAAGCTCACAGAGAATGTATCCATTTAAGAAGAGGAAGTTCTTCAATCAGACCTCATCATCTACATCGGATAGGGGGTCTCATTGTCACGGCATAATTGATACTTCTGACACAAGAGTTGATGGTGCGAACCATGGTGCAGCTATTGAAGCATCATCCTCTATGGCTGGTCAACAAGTACATTCTGGGTCGAGGGATTGTAACGTGAAGCTTAGCATAAAATCCTTCAAGGTCCCCGAGCTTTTCATTGATATCCCTGAAACGGCAACTATTGGTTCACTGAAGAGGACCGTAATGGAGGCGGTGACCACTATACTAGGAGATGAACTACACGTGGGTATCCTTCTTCAGGGAAAGAAGGTACGCGATGACAGCAAAACTCTAATTCAGACTGGGATTTCTCAAGAAGACAAACATCATAGGTTGGGCTTCATGTTGGAGCCGCGACATTCAAAAATTTCTCCTCCTTCATACAATCAAGACCCGTGTTTTCTAACCGCTAGTTCGAATCGGGATATATCCAGGAAACCTACTTCTTTGATGATACAACAAAGAACTTATAATGTCTCCCAAGAGCATTCTTTGATTAAATTTGAAAGTTGTGGTGAAGGAGACATTAATGTGGTCCCCTCTCTAGCAGAAACTTCTCTTAACAATACTATGTCGAAGTGCCGTGCTCTGGTTGCAGTTCCAGCCATTAACATGGAGGCATTAGCTGTCATTCCCTTCCGGCGTAAACCGGGAAATCCCGACTTTGCACAGCGTCGTATCAGGAGGCCTTTCTCGGTTTCTGAAGTGGAAGCACTGGTTCAGGCAGTCGAAAAACTTGGAACTGGAAGATGGCGTGATGTCAAACAGTGTGCTTTTGACAATGCAAAGCACAGGACTTATGTGGATTTGAAGGATAAGTGGAAAACATTAGTGCACACTGCAAGAATCTCCCCTCAACAAAGGAGAGGGGAACCTGTTCCTCAGGAGCTTTTGGACAGAGTCTTATCTGCTCATGCCTATTGGTCTCAGCAGCAATGTAAGCATCAAGTTAAACCACTTTGA 1734 0.4418 MVLQKNLNYSFNGYQVPVVPRASRSTRGKGTIRKKSENNQIQAFEILASVAGNFLQENENSNTDNTASGKEPVDFVGTDVKDVQDEEARLYKGDLFEHGSCSENASGFVPGLQGKHSEQRVVGYSSFLGNHLEGQGQNVLEREEPDHGASKLESSGKYVEKPSLEEGLRHGSAGRKLFNRDDDENFISCTQLSSKNKISGPPPDTSSQRAKSVSGSKNSNGWDNYVLESSQRMYPFKKRKFFNQTSSSTSDRGSHCHGIIDTSDTRVDGANHGAAIEASSSMAGQQVHSGSRDCNVKLSIKSFKVPELFIDIPETATIGSLKRTVMEAVTTILGDELHVGILLQGKKVRDDSKTLIQTGISQEDKHHRLGFMLEPRHSKISPPSYNQDPCFLTASSNRDISRKPTSLMIQQRTYNVSQEHSLIKFESCGEGDINVVPSLAETSLNNTMSKCRALVAVPAINMEALAVIPFRRKPGNPDFAQRRIRRPFSVSEVEALVQAVEKLGTGRWRDVKQCAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLSAHAYWSQQQCKHQVKPL 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0628 577 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 480 539 IPR017930 -
Sto6g0628 577 SUPERFAMILY Ubiquitin-like 291 378 IPR029071 -
Sto6g0628 577 MobiDBLite consensus disorder prediction 244 264 - -
Sto6g0628 577 MobiDBLite consensus disorder prediction 191 220 - -
Sto6g0628 577 Gene3D - 476 576 - -
Sto6g0628 577 CDD SANT_TRF 486 536 - -
Sto6g0628 577 SMART sant 484 537 IPR001005 -
Sto6g0628 577 SUPERFAMILY Homeodomain-like 486 567 IPR009057 -
Sto6g0628 577 Pfam Myb-like DNA-binding domain 485 534 IPR001005 -
Sto6g0628 577 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 144 - -
Sto6g0628 577 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 144 577 - -
Sto6g0628 577 MobiDBLite consensus disorder prediction 138 177 - -
Sto6g0628 577 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 144 IPR031105 -
Sto6g0628 577 PANTHER TELOMERIC REPEAT BINDING PROTEIN 144 577 IPR031105 -
Sto6g0628 577 ProSiteProfiles Myb-like domain profile. 480 535 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0628 Sto-Chr6 6625769 6629433 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto6g0628 Myb_DNA-binding 2.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0628 - - gmx:100807254 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0628 6 6625769 6629433 Sto5g1628 5 11455882 11459001 ECH
Sto6g0628 6 6625769 6629433 Sto6g0628 6 6625769 6629433 ECH
Sto6g0628 6 6625769 6629433 Sto12g0150 12 930190 933316 ECH