Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0625 ATGACAATGGATCCGCGAATTCGGGGTTTTATCGATTCTACAAATCAAAAAAGATTGGGAAATCATCAATCTGTAGTACCAATTCTGCAGAATCAGAGATTTGAAAATTCATTCTTTGATCATCACACAAGGGAATTTGATTACATTCAATCTGATCAATTACCAATGAATAATACACCTTCTTCCTCTACTGTGACCCTTGAGGAACATTCCCCAGAAGATTGTGATTTTTCTGATGCGGTTTTGAGTTACATAAGTCAGATCCTTATGGAAGAAGACATGGAAGATAAAACATGTATGCTTCAAGATTCTTTGGATCTTCAGGCAGCTGAGAAATCCTTCTATGAGGCATTGGGTGAGAAATACCCACCTTCACCTGTACAAAATCCAAATATTATTATCAATGGGAACGATGGTGGCGGTGCAGAAGATAATTTTGCCGGAAGTTACCGTGATTATTGTAATGGGACTTTCACTGGTAATTCCTTGTTTCAAAACCCTAATGAGTTCCCCTTACAACGTATCCAAGGTAATGGAATTTCTCAGTCATCTTACAGCTCTTCAAACAGTGTTGTAAGTAGTTTGGAAGGGCCGGTTGAATCTCCGAGCAGTATTCTTCAGAACCCGGATATGAACAGCGAAAGCCAATCCATTTGGCAATTTAATAAGGGAGTTGAGGAGGCTCAAAAGTTTCTTCCAAGTGGAAATGGGTTGTTTTCTAATTTGGGTGTGATTAATTTACCTCCAGCGGAGCCGAAAGCAGTTAGTGATGATATGTCGGTCAAGGAGGAGAAAGATGAGGGAGAGAATTTTCCCGGTGGAtcaaagggaagaagaaagcAGCCTCATAGAGGGGAGGTAGACGATGACGAAGAAAATAGGAGTAACAAGCAACCGGCGGTATATTCTGAACCAACATTGCGATCAACTATGTTTGATATAGTTCTGCTTCATACTGAAGGAGAAGGTAAGAACCACTTCACAGCGCGCCGTGAGGCTTTACAGAAAAAGGTCAGCAGCAAGGTAGCGATGCCAAATGGTCAATCAAAAGCTTCCAACGGTGGAAAGGGACGTGGGAAGAAACAAAAAGGGAGAAAGGAGGTGGTGGATTTGAGAACACTTCTGGTTCTTTGTGCACAAGCCGTTGCAGCAGATGATAATAAGAGCGCGCACGAGTTTCTGAAGCAGATCAGGCAGCATTCGAACCCTTTTGGGGATGGAAATCAAAGGTTGGCTCATATCTTTGCCGATGGGCTTGATGCACGCTTGGCTGGTACCGGTAGCCAGATTTATAAAGGACTTGTTAGTAAAAAAAGATCGGCCGCTGATCTCCTGAAAGCTTATCATCTGTATCTTGCTGCGTGCCCTTTTAAGAAGATTTCTAATTTTACCTCAAATGTCACAATAAGGACATCGTCATTGAATTCAATGAGAGTCCATGTTATAGATTTTGGTATCCTATATGGTTTCCAGTGGCCAACTTTTATGCAAAGACTTTCATTGAGATCAGGAGGACTGCCGAAACTTAGAATAACCGGAATAGACTTTCCACAACCGGGTTTTAGGCCAGCAGAGAGAGTAGAAGAAACAGGACGCCGCTTGGCAGCTTATGCAAAAGCCTTCAATGTGCAATTTGAGTATGTTGCCATAGCAAAGAAATGGGAAACTATTCAACTCGAGGAGCTCAAGATCGATAGGGATGAATTCCTCGTTGTTAACTGTTTGTATCGAGGTAAGAACTTGCTGGATGAATCTGTGGCAGTAGATAGTCCGAGGAATATTTTCCTCAATTTGATAAGGAAGATCAATCCGAATATATTCATTCATGGCATTGTCAATGGAGCCTTCAATGCGCCTTTCTTCGTCACCCGATTTCGGGAAGCCCTATTTCACTATTCTTCGCTCTTTGATATGCTTGAAACCATCGTACCTCGTGAGGACTGGGAAAGGATGCTGATTGAGAAGGAGATATTTGGTAGGGAAGCGTTGAATGTGATAGCTTGTGAGGGCTGTGAGAGAGTGGAGAGGCCGGAGACATATAAGCAATGGCAAGCCCGGATTCTTAGAGCCGGGTTTACGCAATTACCTTTCTCCCGTGAGGTAGTGGAAAAGGCGATGAACAAAGTACGGTCTTCTTACCACAAGGATTTTCTCATTGATGAAGATAGCAAGTGGTTGTTACAAGCCGACGACCTCAGGTACTGCAATTTCCACAGGTCTCTCTATGTTTGCTCTATGTCATTTTTGTTTGTTGCGTTCTTAACTAACTTTTCTGCAGATTTGATAATGGAAGAGGTTGCGGCGCCCGATGTTGATGGTTTGATTATCCAAAGGTTCAAGCTTGAGAGGTCAGTGAAGTAA 2361 0.4227 MTMDPRIRGFIDSTNQKRLGNHQSVVPILQNQRFENSFFDHHTREFDYIQSDQLPMNNTPSSSTVTLEEHSPEDCDFSDAVLSYISQILMEEDMEDKTCMLQDSLDLQAAEKSFYEALGEKYPPSPVQNPNIIINGNDGGGAEDNFAGSYRDYCNGTFTGNSLFQNPNEFPLQRIQGNGISQSSYSSSNSVVSSLEGPVESPSSILQNPDMNSESQSIWQFNKGVEEAQKFLPSGNGLFSNLGVINLPPAEPKAVSDDMSVKEEKDEGENFPGGSKGRRKQPHRGEVDDDEENRSNKQPAVYSEPTLRSTMFDIVLLHTEGEGKNHFTARREALQKKVSSKVAMPNGQSKASNGGKGRGKKQKGRKEVVDLRTLLVLCAQAVAADDNKSAHEFLKQIRQHSNPFGDGNQRLAHIFADGLDARLAGTGSQIYKGLVSKKRSAADLLKAYHLYLAACPFKKISNFTSNVTIRTSSLNSMRVHVIDFGILYGFQWPTFMQRLSLRSGGLPKLRITGIDFPQPGFRPAERVEETGRRLAAYAKAFNVQFEYVAIAKKWETIQLEELKIDRDEFLVVNCLYRGKNLLDESVAVDSPRNIFLNLIRKINPNIFIHGIVNGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERVERPETYKQWQARILRAGFTQLPFSREVVEKAMNKVRSSYHKDFLIDEDSKWLLQADDLRYCNFHRSLYVCSMSFLFVAFLTNFSADLIMEEVAAPDVDGLIIQRFKLERSVK 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0625 786 MobiDBLite consensus disorder prediction 181 212 - -
Sto6g0625 786 MobiDBLite consensus disorder prediction 337 365 - -
Sto6g0625 786 ProSiteProfiles GRAS family profile. 362 748 IPR005202 -
Sto6g0625 786 PANTHER SCARECROW-LIKE PROTEIN 9 36 728 - -
Sto6g0625 786 MobiDBLite consensus disorder prediction 256 297 - -
Sto6g0625 786 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 728 IPR005202 -
Sto6g0625 786 MobiDBLite consensus disorder prediction 341 355 - -
Sto6g0625 786 Pfam GRAS domain family 371 728 IPR005202 -
Sto6g0625 786 MobiDBLite consensus disorder prediction 250 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0625 Sto-Chr6 6614620 6617084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0625 73 729 GRAS Transcription Factor Family AT2G37650 53.666 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto6g0625 GRAS 6.2e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0625 - - gmx:100801824 1013.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0625 6 6614620 6617084 Sto6g0625 6 6614620 6617084 ECH
Sto6g0625 6 6614620 6617084 Sto12g0149 12 926441 928867 ECH
Sto6g0625 6 6614620 6617084 Sto7g1202 7 10196904 10199141 ECH