Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0612 ATGGGTTTGGCTATCATAGCAAATATAATGGCTATGGCTCTTCTTTTCACTTCTATTTACTTCCTATGTACCCTTTTCATCTTCTTATTCCATTCAAAACCGCCGCTACCACCACCGGGTCCTCCACCGTTGCCACTTATTGGTAACCTTCACATTTTGGGTAAACTCCCACATCGAACCCTTCAATCCTTGGCCAAAACACATGGCTCAATCATGTCCCTTAAATTGGGACAGGTCCCAACGGTCGTGATCTCTTCCTCTCAAGCCGCCGAGCTCATCTTCAAGACACACGACGTCGTTTTTGCCAATCGTGCGAAAACTGAAGCTTATGATTACTTCTCCTATGGCTTCAAAGGCATAGCTTTTGCTGAGTATGGTCCCTACTGGCGCCATGTGAGGAAGTTGTGCACTTCGCAACTTCTGAGTTCATCGAAAGTGGAAATGTTTGGTGGTTTGAGAAAGAGAGTGATGGGTTCAGTGGTGAAATCACTTGAGAAAGCCTCGGCTTCGAGAGAGATTGTGAACCTTAGTGAAGTATTGCATAAGCTTACggaggatttagtgtttaagatgaCATTTGGAAGTGATAGTAATAAGGATGATGCTTTTAATTATATGGAGCTTGTTCAAGAGGGAATGGCTCTTGCTGGAGCTTTTAACATAGCAGATTATTTGCCTTGGCTCCGACCTTTTGATCTTCAGGGATTAACAAGGCGACTAAAGAAATGCCGGAAAGCAATGGATGAAGTACTGGAGAAGATACTGAAAGAACATGAAGAAGCTCACCAAAATCAAAAGGCAGAGAAAGAGAATGGTGAAAGCTTCATAGGGATATTGCTCTCAATGATGGACCAACCCATGGATTTGCATGGTCATGACAAACAACATGTGATCGATCGAACTACCATAAAGGCTATCATAGTAGATATGTTTGGTGCAGCATTAGAGGCAAATGCTATAGTACTTGAGTGGGCTTTCTCGGAATTGTTAAGGCATCCAAGGGTGATGAAGAATGTGCAAGATGAGATTGAAAGTGTAGTAGGAAGGAATAGAATGGTGGAGGAGACAGATTTATTAAACTTTAATTACTTGGATTTGGTAGTGAAGGAGACTTTAAGGTTACATCCTGCTGGAGCTTTGATTCCAAGAGAGTCAAGAGAAGATATTATCATGGATGGTTATTTCATAGAGAAGAAGTCAATAGTATTGGTGAATTCATGGGCAATAGGTCGAGATCCTAAAGTGTGGTCGGACAATGCTGAAACATTTTATCCAGAAAGATTCCTAGATAACAAGGTGGATGTACGAGGACAACATCACCAACTCATACCATTTGGATCGGGACGAAGAAGATGTGTTGGTATGCAAATGGGTTTGGTGATAATCAAACTTGTGTTGGCTCAATTGGTGCATTGTTTTGATTGGGAGCTTCCTCATGGTATTAGTCCCATTGATTTGGATATGACTGAAAAATTTGGGCTCACAGTGCCAAGAGCTAAACAATTGCTAGCAATTCCATCTTCTCGAATATTACAGAGTTCTTGTCGTCTAGTTTCACAGATATGTTATGATTGA 1575 0.4095 MGLAIIANIMAMALLFTSIYFLCTLFIFLFHSKPPLPPPGPPPLPLIGNLHILGKLPHRTLQSLAKTHGSIMSLKLGQVPTVVISSSQAAELIFKTHDVVFANRAKTEAYDYFSYGFKGIAFAEYGPYWRHVRKLCTSQLLSSSKVEMFGGLRKRVMGSVVKSLEKASASREIVNLSEVLHKLTEDLVFKMTFGSDSNKDDAFNYMELVQEGMALAGAFNIADYLPWLRPFDLQGLTRRLKKCRKAMDEVLEKILKEHEEAHQNQKAEKENGESFIGILLSMMDQPMDLHGHDKQHVIDRTTIKAIIVDMFGAALEANAIVLEWAFSELLRHPRVMKNVQDEIESVVGRNRMVEETDLLNFNYLDLVVKETLRLHPAGALIPRESREDIIMDGYFIEKKSIVLVNSWAIGRDPKVWSDNAETFYPERFLDNKVDVRGQHHQLIPFGSGRRRCVGMQMGLVIIKLVLAQLVHCFDWELPHGISPIDLDMTEKFGLTVPRAKQLLAIPSSRILQSSCRLVSQICYD 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0612 524 Coils Coil 233 271 - -
Sto6g0612 524 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g0612 524 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g0612 524 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g0612 524 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g0612 524 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g0612 524 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g0612 524 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g0612 524 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 511 - -
Sto6g0612 524 Coils Coil 166 186 - -
Sto6g0612 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Sto6g0612 524 Gene3D Cytochrome P450 31 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g0612 524 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 511 - -
Sto6g0612 524 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g0612 524 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g0612 524 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g0612 524 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g0612 524 Pfam Cytochrome P450 38 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g0612 524 SUPERFAMILY Cytochrome P450 38 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0612 Sto-Chr6 6513781 6517235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0612 45 511 Monolignol Biosynthesis Gene Families AT4G36220 38.494 7.88e-119 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0612 - - gmx:100782715 596.66