Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0585 ATGGCGGAGGGTTTTGAGGCTTACCATGTTCCCCAGCAAAGCAGAAGAGAAAAGCTGAGAGTGGTTTCTCACATCAATAACCAACACGCTTTTTTCCCTCCCGGGTGCGCAGGTTTACTCCCTCTCTACGATCCTTCCCTTATTCCCTCCGATTTCCTAACGTGCGCCTCCACCCCACTTGTTCACAATAATAATCCCGATTCCTCCAATTTGCAAATTGACCCCGCCACTATCCAAATTATCAACAGCACCCCATTTCTTGGTTTTCCTCACAGTAACAATTCCAATACTACTCGGGAGCCCttgtctctatctctctcttcttcatctcccGTGAATGTCGTTCTTCCGCGAAACGACGTCGTTTCGGGAGGCTCCTCCTCTTCACATGTCCTTCCAATGGGCCCATTTACGGGCTACGCTTCGGTGTTGAAGGGATCCAGGTTCCTGAAGCCAGCTCAGCAATTGTTGGAGGAGCTTTGCGACTTTGCTGGTCGTGAAGTTTACGCGCCAGAAAAGATGATGTCTGATGATATGACGTCGTTTTTGGACCCTCCGTCGTCGTCCCAGAGCTTCACCTCCGCCGATGGGGCTGACGGTTCTAAGAAGAAGTCCAGACTATTAACCATGCTCGATgagGTGTACAGAAGGTACAGGCAATACTATGAACAAATGGAAGCAGTAGTGAGTTCATTTGAGTACGTTTCAGGGCTGGGTAACGCAGCTCCTTATGCAACTTTGGCTATAAAAGCCATGTCCAAACACTTCAAGTGCTTGAAGAATGTGATCACCGACCAGCTTGATCAGTTCACAAATAGTAATAATAGTAAGGCTCATTTTCACAATATAAGCGACAAGAAGGATGATTCTCCAAGGTTTGGGAATGATGGTCACAGAAGATCAGGAGGACCTTATAGCCAAATTAGGGGTATTCACAACCCTGAATTCTTAGGGCACCAACCCAATTGGCGACCTCAAAGAGGACTTCCTGAGCGTGCTGTCACAGTTCTTAGGGCTTGTTATCCCACTGACTCGGACAAGCTAATGCTGGCCAAACAAACTGGTCTATCTCGTAGCCAGgTGTCAAACTGGTTCATTAATGCAAGAGTAAGAGTGTGGAAACCAATGGTGGAAGAAATACACACTCTAGAAACACGACAATCCCAGAAGAATCCTCAAATCATCACAGAAGAACAGAACAACAAGAACAAGTTTCAAGATTCTCCTTTCAAACGCACTAGAAATAATTATGAAGCTCCTCCTCCTCAGGTGGCTTATGATAATGCAATAagcattaataataataataacgaaGCAGGTGTGGGAGGTGGAGCAGCGACCAATGGCGTCTCGCTCACACTGGGTCTCCACCAGAACAATGGTGGGCTTGCTCCATCTGATCAACCGTTCCACCCACCCATCAGTGAAGCGCACCGTTTTGGGCTTGGGCTGCAAGTTCCCAGCAGTAACGAAGGATTTGTTATGAGTGGTTCTCAAGAATCACAGAATCGGCATCATCTTCATTTAATGGGAGGCCACTTATTGCATGATTTTGTTggctaa 1563 0.4523 MAEGFEAYHVPQQSRREKLRVVSHINNQHAFFPPGCAGLLPLYDPSLIPSDFLTCASTPLVHNNNPDSSNLQIDPATIQIINSTPFLGFPHSNNSNTTREPLSLSLSSSSPVNVVLPRNDVVSGGSSSSHVLPMGPFTGYASVLKGSRFLKPAQQLLEELCDFAGREVYAPEKMMSDDMTSFLDPPSSSQSFTSADGADGSKKKSRLLTMLDEVYRRYRQYYEQMEAVVSSFEYVSGLGNAAPYATLAIKAMSKHFKCLKNVITDQLDQFTNSNNSKAHFHNISDKKDDSPRFGNDGHRRSGGPYSQIRGIHNPEFLGHQPNWRPQRGLPERAVTVLRACYPTDSDKLMLAKQTGLSRSQVSNWFINARVRVWKPMVEEIHTLETRQSQKNPQIITEEQNNKNKFQDSPFKRTRNNYEAPPPQVAYDNAISINNNNNEAGVGGGAATNGVSLTLGLHQNNGGLAPSDQPFHPPISEAHRFGLGLQVPSSNEGFVMSGSQESQNRHHLHLMGGHLLHDFVG 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0585 520 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 99 459 - -
Sto6g0585 520 SMART HOX_1 323 379 IPR001356 GO:0003677
Sto6g0585 520 MobiDBLite consensus disorder prediction 384 416 - -
Sto6g0585 520 Pfam Homeobox KN domain 340 371 IPR008422 GO:0003677|GO:0006355
Sto6g0585 520 MobiDBLite consensus disorder prediction 274 308 - -
Sto6g0585 520 Pfam Associated with HOX 143 264 IPR006563 -
Sto6g0585 520 SUPERFAMILY Homeodomain-like 339 381 IPR009057 -
Sto6g0585 520 ProSiteProfiles 'Homeobox' domain profile. 341 375 IPR001356 GO:0003677
Sto6g0585 520 Gene3D - 319 389 - -
Sto6g0585 520 SMART prehox3 138 265 IPR006563 -
Sto6g0585 520 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 99 459 - -
Sto6g0585 520 MobiDBLite consensus disorder prediction 181 198 - -
Sto6g0585 520 MobiDBLite consensus disorder prediction 386 403 - -
Sto6g0585 520 MobiDBLite consensus disorder prediction 179 201 - -
Sto6g0585 520 CDD homeodomain 323 376 IPR001356 GO:0003677
Sto6g0585 520 MobiDBLite consensus disorder prediction 280 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0585 Sto-Chr6 6243227 6247148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0585 1 520 Homeobox Transcription Factor Family AT5G02030 42.079 1.18e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Sto6g0585 POX 8.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0585 - - pvy:116126263 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0585 6 6243227 6247148 Sto6g0585 6 6243227 6247148 ECH