Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0567 ATGGGAGCTCGTTGTTCTAAATTCTCTCTCTGCTGGTTCCACTCCCACCTCAAACCTTCCGTCCTTGAGTCCTCCGACCTGGAAAATGGAGGAAAAAGTGAGCGAGAAATGTGGCCAAGTTTTGGGGAGTTTAGCTTGGAGCAACTTAAGGCGGCGACAAATGGTTTCGCCGCCGAAAACATAGTGTCGGAGCACGGCGAGAAAGCTCCCAATGTGGTGTACAAAGGGAAGCTCGATAATGGCCACTGGATCGCCATCAAACGCTTCAACAAATTCGCTTGGCCCGATTCTCGTCAATTTCTTGAGGAAGCTAAGCAAGTGGGGAGTCTGAGAAGTGAGAGATTGGCGAACTTGATTGGTTATTGCTATGAAGGGGACGAGAGGTTGCTGGTGGCAGAGTTCATGCCCCATGAAACTCTGGCTAAGCATCTCTTTCACTGGGAAGCACAACCCATGAAATGGGCAATGAGGTTGAGGGTGGCCTTGTACTTAGCTGAAGCTTTAGACTACTGCAGCAGTAAAGGAAGGGCTTTGTATCATGATCTAAATGCCTATAGGATCTTGTTTGATCAGGAAGGTAATCCCAGGTTGTCTTGCTTTGGACTCATGAAGAACAGTAGAGACGGCAAGAGTTACAGTACTAACTTGGCTTTCACCCCTCCTGAGTACTTGAGGACAGgTAGAGTGACACAAGAGAGtgtggtttacagttttggaacTCTGATGCTAGATCTCCTGAGTGGTAAACATATTCCTCCAAGCCATGCACTAGATCTGATCCGTGGCAAAAACTTTCTGATGTTAATGGATTCTGCCTTGGAGGGTCACTTTTCAAAGGAGGATGGAACTGAGTTGGTGCGTCTGGCTTCTCGTTGTTTACAGTATGAAGCTCGCGAGAGGCCAAATGCAAAGTCCCTTGTTACATCTCTAATGTCACTTCAGAAAGAAACTGAGGTCCCCTCATATGTTTTGATGGGTATTCGGCTTGAAGCTGCATCCTCAACAAAGCCATCATTAACACCTTTTGGTGAAGCTTGTTTGAGACTTGATCTAACTGCCATACATGAAATTCTGGAGAAGATTGGATACAAGGATGATGAGGGAATTGCCAATGAGCTTTCCTTTCAATTGTGGACCAGTCAAATGCAGGAGACCCTGAATTTGAAGAAGCATGGAGATACTGCTTTCCGAGCCAAGGACTTTGTCACTGCCATTGACTGCTACACACAATTCATAGATGGAGGGACCATGGTATCACCCACTGTGTATGCAAGGCGTTGCTTGTCTTATTTGATGAATGGGATGGGACAGGAAGCTCTTGGGGATGCTATGCAAGCCCAAGTGGTGTCACCTGAATGGCCTACTGCTTTGTATCTTCAAGCAGCTTGCCTTTTCAGCCTTGGAATGGAGAATGATGCACAAGAAACTCTCAGAGATGGCACAAACATGGAAGCCAGAAAGAACaaaaatttgaaaactgtatag 1485 0.4532 MGARCSKFSLCWFHSHLKPSVLESSDLENGGKSEREMWPSFGEFSLEQLKAATNGFAAENIVSEHGEKAPNVVYKGKLDNGHWIAIKRFNKFAWPDSRQFLEEAKQVGSLRSERLANLIGYCYEGDERLLVAEFMPHETLAKHLFHWEAQPMKWAMRLRVALYLAEALDYCSSKGRALYHDLNAYRILFDQEGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTQESVVYSFGTLMLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKEDGTELVRLASRCLQYEARERPNAKSLVTSLMSLQKETEVPSYVLMGIRLEAASSTKPSLTPFGEACLRLDLTAIHEILEKIGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFVTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNGMGQEALGDAMQAQVVSPEWPTALYLQAACLFSLGMENDAQETLRDGTNMEARKNKNLKTV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0567 494 Gene3D Tetratricopeptide repeat domain 382 494 IPR011990 GO:0005515
Sto6g0567 494 Pfam Protein tyrosine and serine/threonine kinase 73 310 IPR001245 GO:0004672|GO:0006468
Sto6g0567 494 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Sto6g0567 494 SUPERFAMILY Protein kinase-like (PK-like) 34 320 IPR011009 -
Sto6g0567 494 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Sto6g0567 494 SUPERFAMILY TPR-like 386 479 IPR011990 GO:0005515
Sto6g0567 494 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 - -
Sto6g0567 494 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 IPR045845 GO:0004672|GO:0009742
Sto6g0567 494 ProSiteProfiles Protein kinase domain profile. 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0567 Sto-Chr6 6098187 6102919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0567 44 310 Glycoside Hydrolase AT3G07070 35.254 1.64e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Sto6g0567 PK_Tyr_Ser-Thr 5.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0567 - - gmx:100814477 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0567 6 6098187 6102919 Sto6g0567 6 6098187 6102919 ECH