Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0566 CTGATATTGAATCAGAATGGAACAGCATCGAAACGCAACAAGGGACCTGGATTTTACCTAGCTCGTAGCTCCGTCAACGCTGGTGGCGGCAGGGTGCAACGACCACGGCGACCGGCGGTGAACGCTCACGCAAGGGACTCCGATAGCGGCGCCGTTTCGGAGCGTCTCTTCCGTCTCTCTATGTTCTTGGCGAGTCAAGATTGTTATTCCGCAATGCAGGAGATCACAGCCTTATTTAATCATTTGACAGTGACAGGCAAgggaaatctagattttaagGTGTCCCGTACTGCAGATTTGGAGCAAGGAAGAAGCCAACGTAGTGACATGAGTGGTCAAGGTAGTGTTTGCTTCTCTGATGTTGAAGATGGCTCTTGCTATTCCCATTTCTATTCAACAAATGGTGGCTCATACGATGAGCATAGCTTTGCTTGTGATTCTGATCCTGATGAGGTTGGGGTTGTTCATGAATCTGGAAGAGGCTCTTGTGTTAGTGAATGTTCAGTGGAGGTGGAAATTGAAAGTGGGGTTCCTGAAATTAAGGTGCATTTGGGCAAAGCAGAGAGGGATTGTAGGATTTGTCACATGGGTTTGGAGAGTGAAAGCCATGAATCTGGGGTTCCAATTGAATTGGGATGTTCTTGCAAGGATGATTTAGCTGCTGCTCATAAAAACTGTGCTGAAACCTGGTTCAAGATCAAAGGAAATAGGACCTGTGAAATCTGTCATTCTGTGGCACGAAATGTGTATGGAGCAAATGAGGAGACAACTGAGAATTTAAGTGATAGCAACAATGCTACTGCAGTATCAACAACTTCAGCTCCAGCTACCCCAGAAACTCGAAGATTTTGGCACGGCCATCGCTTCCTGAATTTTCTGCTTGCTTGTATGGTTTTTGCATTTGTCATATCATGGCTTTTTCACTTCAATGTGCCATCATCCTAG 945 0.4519 LILNQNGTASKRNKGPGFYLARSSVNAGGGRVQRPRRPAVNAHARDSDSGAVSERLFRLSMFLASQDCYSAMQEITALFNHLTVTGKGNLDFKVSRTADLEQGRSQRSDMSGQGSVCFSDVEDGSCYSHFYSTNGGSYDEHSFACDSDPDEVGVVHESGRGSCVSECSVEVEIESGVPEIKVHLGKAERDCRICHMGLESESHESGVPIELGCSCKDDLAAAHKNCAETWFKIKGNRTCEICHSVARNVYGANEETTENLSDSNNATAVSTTSAPATPETRRFWHGHRFLNFLLACMVFAFVISWLFHFNVPSS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0566 314 Pfam RING-variant domain 191 242 IPR011016 GO:0008270
Sto6g0566 314 PANTHER OS01G0850200 PROTEIN 96 313 - -
Sto6g0566 314 SUPERFAMILY RING/U-box 188 246 - -
Sto6g0566 314 MobiDBLite consensus disorder prediction 26 47 - -
Sto6g0566 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 180 252 IPR013083 -
Sto6g0566 314 CDD RING_CH-C4HC3_MARCH 191 243 - -
Sto6g0566 314 ProSiteProfiles Zinc finger RING-CH-type profile. 183 249 IPR011016 GO:0008270
Sto6g0566 314 SMART ringv_2 190 243 IPR011016 GO:0008270
Sto6g0566 314 PANTHER ZINC FINGER, RING-CH-TYPE 96 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0566 Sto-Chr6 6082840 6089469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0566 154 314 C3H Transcription Factor Family AT5G05830 63.190 3.16e-69 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0566 - - gmx:100808666 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0566 6 6082840 6089469 Sto6g0566 6 6082840 6089469 ECH