Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0537 ATGAACAGGGGAATTGAAGTTCCCTCTCCAGCCTCCTATCTTCAAAACTCCAATTGGTTGTTCCAAGAAAGCATAGGAACAAAATGGACTCCAGAAGAGAACAAGCGGTTTGAGAATGCTTTGGCTCTGTATGACAGAGATACTCCAGATCGTTGGGTGAAGGTTGCAGCTATGCTTCCTGGGAAAACAGTTGGTGATGTGATTAAGCAGTACAGAGAACTGGAAGAAGATGTTAGTGTCATTGAAGCTGGGTTGTTCCCAATTCCTGGGTATGATACTAATTCTTTCACGTTGGAGTGGGTCAATAACCATGGTTTTGATGATTTCAAGCAACTCTATACTGCTGGTGGGAAAAGGGGTGCTTCCACTCGGCCATCTGAGCAGGAGAGGAAGAAAGGAGTGCCATGGACTGAAGAGGAGCACAGGCAATTTCTGATGGGTCTCAAGAAGTATGGTAAAGGGGACTGGAGAAACATATCTCGGAATTTTGTGACCACGAGAACACCTACTCAGGTTGCTAGTCATGCTCAGAAGTATTTCATCAGGCAGCTTACAGGAGGCAAGGATAAGAGGAGATCCAGCATCCATGACATCACAGTGGTCAATCTCCCAGAAACCAAGTCTCCTCCTTCATCAGACAGTCACAAACCTTCTTCCCCTGATCACTCAGTCCAGGTTATGAATCTGCAGAATAATCCAAATTTCCCGAGGATGGTTAAACAGGAATATGACTCAAAATTACCATATGAAGCCATGCCAATGGTATTCAATTCAACAAATGGAAACATGTTCATGGCACCTTTTTGTGGGATTTCTTCGGTCGGATCTGGTCCACAGGAGCAGTGTTTACTCAGAGTGATGTTGGATTGCTTCTTAAGATGCTTTGTGGTGGTTTATGTGAATATGTTGAGGAAGACCTTGAGACCTGAGTTAGTCCTTTTAGTGGCAATATCCTGTGAGCTTGCATCTGATGCGAATCTTCCTATCTAA 990 0.4424 MNRGIEVPSPASYLQNSNWLFQESIGTKWTPEENKRFENALALYDRDTPDRWVKVAAMLPGKTVGDVIKQYRELEEDVSVIEAGLFPIPGYDTNSFTLEWVNNHGFDDFKQLYTAGGKRGASTRPSEQERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITVVNLPETKSPPSSDSHKPSSPDHSVQVMNLQNNPNFPRMVKQEYDSKLPYEAMPMVFNSTNGNMFMAPFCGISSVGSGPQEQCLLRVMLDCFLRCFVVVYVNMLRKTLRPELVLLVAISCELASDANLPI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0537 329 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Sto6g0537 329 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Sto6g0537 329 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 226 IPR043363 -
Sto6g0537 329 SUPERFAMILY Homeodomain-like 129 183 IPR009057 -
Sto6g0537 329 Gene3D - 134 184 - -
Sto6g0537 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Sto6g0537 329 SMART sant 25 77 IPR001005 -
Sto6g0537 329 SMART sant 132 182 IPR001005 -
Sto6g0537 329 CDD SANT 28 74 IPR001005 -
Sto6g0537 329 Gene3D - 22 88 - -
Sto6g0537 329 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 131 183 IPR006447 GO:0003677
Sto6g0537 329 SUPERFAMILY Homeodomain-like 27 82 IPR009057 -
Sto6g0537 329 MobiDBLite consensus disorder prediction 123 137 - -
Sto6g0537 329 MobiDBLite consensus disorder prediction 199 225 - -
Sto6g0537 329 MobiDBLite consensus disorder prediction 117 137 - -
Sto6g0537 329 MobiDBLite consensus disorder prediction 190 225 - -
Sto6g0537 329 CDD SANT 135 180 IPR001005 -
Sto6g0537 329 PANTHER TRANSCRIPTION FACTOR DIVARICATA 7 226 - -
Sto6g0537 329 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Sto6g0537 329 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Sto6g0537 329 ProSiteProfiles SANT domain profile. 24 79 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0537 Sto-Chr6 5829260 5831027 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto6g0537 Myb_DNA-binding 2.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0537 - - gmx:778077 442.195