Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0536 ATGCCTTCCTCTTCCACCACCATCATCTCCAAATCCACTATTTACCCATACCAACCCTCCACTCTCAAAACCCTCAGGCTCTCTGTATCTGACCTTCCCATGCTCTCTTGCCACTACATCCAAAAGGGCATCCTCCTTCCCCCTCCTCCCTTCTCCTTCCATGACCTCCTTCTCTCCCTCAAACGCTCCCTCTCCCACGCTCTCTCCCACTTCCCCGCCCTCGCAGGCCGCCTTGTCACCGACTCTGACGGCTACGTTCACATACTCTGTAACGACGCCGGCGTTGAATTCATCCACGCCACCGCCAAACACCTCCCCACTGCTTCCATTTACTTCCCCGGTCTTCTCACTGATGTTCCCAATTCCTTCAAGGAGTTCTTCGCTTACAACAAGACCATTTCCTACTCCGGCCACCACCTCCCTCTCGTCGCCGTCCAAGTCACCGAGCTCGCCGACGCGGTGTTCATCGGATGCACCGTCAACCACGCCGTCACCGATGGGACTTCCTTCTGGCATTTCTTCAACACGTTCGCTGAGATCTGCAAGGGCGCGAAGAAGATATCGAAGTCGCCGGACTTCAGTCGCGACACCGTCTTCAACTCCTCCGCCGTGCTGAGAGTCCCCGCCGGCGGCCCCAAGGTCACCTTCGACGACGAGCAGCCGTTGAGGGAGAAAGTGTTCCATTTCACCAGAGAATCGATTGTGAAACTGAAGATCAGAGCTAATAATTACGGCAATAACCGTTTCGCGGATTCTGCGGAGTTCGTTGAAAAGCAAGTTAACGGCAAGATAACGCCCGTTTTGTGTCACGCGGTGAGGAACAAAACGGAGGAGATTTCGTCGTTTCAGTCGTTATCCGCGCAGCTGTGGCGCTCGGTGACACGTGCGAGGAAGCTGGACCCAcacaaaacgtcgacgtttcgcATGGCGGTGAACTGCCGCCACCGCCTACACCCGAAGATGGACGCTTATTACTTCGGCAACGCGATCCAGAGCATCCCGACCGTCGCCGAGGCCGGAGAGATCCTTTCTCGCGATCTACGGTGGTGCGCCGAACTTCTCCACAAAAACGTCGTCGCACACGACGACGCTACGGTGCGACGCGGCGTAGAGGATTGGGAGAAGGCGCCGAGGTTGTTCCCGCTAGGGAACTTCGACGGCGCGTCAATGACGATGGGTAGCTCTCCGCGTTTCCCGATGTACGACAACGACTTCGGGTGGGGCCGACCCTTGGCGATCCGGAGCGGCAAGGCGAACAAGTTCGACGGAAAGATCTCGGCGTTTCCGGGCAGAGAAGGGAAAGGGAGTGTGGATCTGGAGGTCGTTTTGGCGCCTGAGACGATGTGGGGACTTGAAAACGACATGGAGTTCATGCAGTACGTAACGGGAAGCGTGTGA 1398 0.5615 MPSSSTTIISKSTIYPYQPSTLKTLRLSVSDLPMLSCHYIQKGILLPPPPFSFHDLLLSLKRSLSHALSHFPALAGRLVTDSDGYVHILCNDAGVEFIHATAKHLPTASIYFPGLLTDVPNSFKEFFAYNKTISYSGHHLPLVAVQVTELADAVFIGCTVNHAVTDGTSFWHFFNTFAEICKGAKKISKSPDFSRDTVFNSSAVLRVPAGGPKVTFDDEQPLREKVFHFTRESIVKLKIRANNYGNNRFADSAEFVEKQVNGKITPVLCHAVRNKTEEISSFQSLSAQLWRSVTRARKLDPHKTSTFRMAVNCRHRLHPKMDAYYFGNAIQSIPTVAEAGEILSRDLRWCAELLHKNVVAHDDATVRRGVEDWEKAPRLFPLGNFDGASMTMGSSPRFPMYDNDFGWGRPLAIRSGKANKFDGKISAFPGREGKGSVDLEVVLAPETMWGLENDMEFMQYVTGSV 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0536 465 Gene3D - 220 458 IPR023213 -
Sto6g0536 465 Gene3D - 6 209 IPR023213 -
Sto6g0536 465 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 5 462 - -
Sto6g0536 465 SUPERFAMILY CoA-dependent acyltransferases 59 183 - -
Sto6g0536 465 Pfam Transferase family 6 458 - -
Sto6g0536 465 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0536 Sto-Chr6 5800778 5802175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0536 60 448 Monolignol Biosynthesis Gene Families AT5G48930 27.578 1.48e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0536 - - zju:107406452 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0536 6 5800778 5802175 Sto6g0536 6 5800778 5802175 ECH