Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0529 ATGGACGTGATTAAGTCTCAGCAAATATCATCGAGGCCCATCGAGAAGGTCATAGTGCATCCACTGGTTCTTCTCAGCATCGTCGACAACTACAATCGGGTCGCCAAGGACACTCGCAAGCGGGTCGTCGGAGTCTTGCTCGGTAGTTCCTTCAAGGGCACCGTCGATGTCAGCAACAGCTACGCAGTGCCTTTtgaggaagatgacaaggatcCGAGCATCTGGTTCCTTGACCACAATTACCATGAATCCATGTTTTCTATGTTTAAGAGAATAAATGCTAAGGAGCATGTTGTGGGCTGGTACAGTACGGGCCCAAAGCTGCGTGAGAATGATCTTGATATCCACAGATTATTTCACAACTATGTCCCAAATCCTGTGTTGGTCATCATTGATGTCCAGCCCAAGGAGTTGGGAATACCTACCAAGGCTTACTATGACGTTGAAGAAGTAAAGGAGAATGCTACACAGAAAAGCCAAAAGGTTTTTGTTCATGTGCCTTCAGAAATTGCTGCTCATGAGGTTGAGGAAATTGGAGTTGAACACTTGTTGAGGGATGTTAAAGATACAACCATAAGTACACTTGCAACTGAGGTTTCTGGTAAACTTACAGCGCTAAAGGGTTTAGATGCAAGATTAAAAGAGATTCGTGGTTACCTTGATCTGGTTATTGACGGAAAGCTTCCTTTAAACCATGAGATACTTTACCATTTGCAGGACGTCTTCAACCTCCTTCCAAATCTCAATGTATCGGAGTTAATCAAGGCTTTTGCAGTGAAAACAAATGACATGATGCTAGTCATATATCTCTCTTCTCTGATCCGGAGTGTCATTGCACTTCACAACTTGATTAATAACAAGGTGACCTTCCCTCCTCTGAAAAACAAAGTCATTTTTGGTGCTTGGCAGTATTTTACTGTTGTAACTGACACATTTGATGATTTGCAGATGCTGAACAAAGAGCATGAGAAAGCTGAAGATGCAAAGCCAGTTGCAGTTCCTGCTGCAAGTGGAAGCTGA 1020 0.4245 MDVIKSQQISSRPIEKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVSGKLTALKGLDARLKEIRGYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVSELIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKVTFPPLKNKVIFGAWQYFTVVTDTFDDLQMLNKEHEKAEDAKPVAVPAASGS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0529 339 SMART pad1_6 16 150 IPR000555 GO:0005515|GO:0008233|GO:0008237
Sto6g0529 339 Pfam Maintenance of mitochondrial structure and function 174 285 IPR024969 -
Sto6g0529 339 CDD MPN_RPN7_8 15 288 IPR033858 GO:0005838
Sto6g0529 339 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7 1 288 - -
Sto6g0529 339 ProSiteProfiles MPN domain profile. 17 151 IPR037518 -
Sto6g0529 339 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 15 124 IPR000555 GO:0005515|GO:0008233|GO:0008237
Sto6g0529 339 Gene3D Cytidine Deaminase, domain 2 9 194 - -
Sto6g0529 339 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0529 Sto-Chr6 5749992 5753376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0529 19 248 Eukaryotic Initiation Factors Gene Family AT2G39990 29.487 6.11e-27 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0529 6 5749992 5753376 Sto6g0529 6 5749992 5753376 ECH