Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0524 ATGGAAGGGAAGGAAGAAGATGTGAGGGTTGGAGCCAACAGGTTCAGAGAGGGTCAGCCCATAGGAACCGCGGCTCAGAATGGGAGAGACTACAAGGAGCCACCGGGTGCACCCTTGTTTGAGGCTGCTGAGCTGTGGTCATGGTCTTTCTACAGAGCAGGCATAGCAGAGTTTGTGGCCACTTTCTTGTTCCTATACGTCACCGTTTTGACTGTGATGGGTGTGGCCAAATCTCCCTCCAAATGCTCCTCTGTGGGAGTTCAAGGCATTGCTTGGTCTTTTGGTGGAATGATCTTTGCTCTTGTTTATTGCACTGCTGGCATCTCAGGTGGGCACATAAACCCAGCAGTGACATTTGGACTATTGCTGGCAAGGAAGTTGTCAGTGACAAGGGCATTGTTCTACATAATGATGCAGTGTTTGGGTGCCATATGTGGTGCTGCTGTGGTTAAGGGGTTCCAACCACATGAATATGAGAGACTTGGTGGTGCAGCCAACACCCTCACTTCTGGTTACTCCAAAACCAGTGGGCTTGGGGCTGAGATTGTGGGCACTTTTCTTCTTGTTTACACTGTCTTCTCTGCCACTGATGCCAAGAGAAATGCCAGAGACTCCCATGTTCCTATATTGGCACCATTGCCTATTGGATTTGCTGTGTTTGTGGTGCATTTGGCTACAATTCCAGTGACAGGCACAGGAATCAACCCAGCCAGAAGCTTAGGTGCAGCTCTTATCTACAACAAGCACCAAGCTTGGGATCACCATtgGATCTTCTGGGCAGGACCTTTCATTGGGGCAGCACTTGCAGCACTTTACCATCAGATAGTGATAAGGGCtcttcccttcaaatctaaGTGA 858 0.4848 MEGKEEDVRVGANRFREGQPIGTAAQNGRDYKEPPGAPLFEAAELWSWSFYRAGIAEFVATFLFLYVTVLTVMGVAKSPSKCSSVGVQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSVTRALFYIMMQCLGAICGAAVVKGFQPHEYERLGGAANTLTSGYSKTSGLGAEIVGTFLLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFVVHLATIPVTGTGINPARSLGAALIYNKHQAWDHHWIFWAGPFIGAALAALYHQIVIRALPFKSK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0524 285 Pfam Major intrinsic protein 45 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g0524 285 Gene3D Glycerol uptake facilitator protein. 37 284 IPR023271 -
Sto6g0524 285 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Sto6g0524 285 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g0524 285 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g0524 285 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g0524 285 PRINTS Major intrinsic protein family signature 180 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g0524 285 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g0524 285 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g0524 285 TIGRFAM MIP: MIP family channel proteins 56 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g0524 285 PANTHER AQUAPORIN PIP1-4-RELATED 1 285 - -
Sto6g0524 285 CDD MIP 52 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g0524 285 SUPERFAMILY Aquaporin-like 44 278 IPR023271 -
Sto6g0524 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 285 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0524 Sto-Chr6 5667814 5670245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0524 1 285 Major Intrinsic Protein MIP AT3G61430 81.754 1.34e-171 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0524 K09872 - qsu:111983155 505.753