Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0522 ATGATAGGCAATTGCTTTGGTGCCTTGAATTGTTGTGGAGGGAAGAATGATCCTGCTGACCAGTCAAATCAACAAGAGATTGCGACTAAAACTTTTAGTTATAACTCGTTGAGATCAGCTACAAGAGATTTTCATCCATCTAGCAAAATTGGTGGAGGAGGTTATGGAGTTGTCCACAAGGGAGTTTTAAGGGATGGTACTCAAGTTGCTATCAAGTCTCTTTCTGTAGAGTCTAAACAAGGAACAAAAGAATTTATGACAGAAATTgatattatatcaaatatacaACATCCAAACCTTGTGCAACTAATCGGCTGCTGTGTTGAGGGCAACTATCGGATATTGGTGTATGAATTTCTGGAAAACAACAGCGTAGCGAGTTCTTTGCTTGGGTTCAAAAGCAAACGTGTTGCTCTGGATTGGCCAAAGAGGGCTGCTATCTGTCGTGGTACAGCTTCTGGTCTTGCATTTTTACATGAGGAGGCTCAGCCAAACATTGTTCACAGAGATATCAAAGCTAGCAATGTACTGCTTGACAAGAACTTTGATCCTAAAATAGGGGATTTCGGCCTTGCAAAACTTTTTCCCGACAATGCCACCCATATTAGTACTCGAGTCGCAGGAACTATGGGATATCTTGCCCCAGAATACGCACTTTTAGGACAACTTACGAGGAAGGCAGATGTGTACAGTTTTGGGGTTCTCATGCTTGAGATAATCAGTGGTAAAAGTAGTAGTAAAGCTGCATTTGGAGAGAATCTCTTGGTTCTAGTGGAATGGACATGGAAGCTGAAAGAAGAAAATAGGCTTCTGGACATTGTTGATCCAGAACTAACTGAATATGATGAGACTGAGGTTCTTCGTTTTATTAAGATTGCTCTGTTCTGTACACAAGCAACTGCACATCACAGACCCTCCATGAAGCAAGTCATAAAAATGCTTTCCAAGGAAGTACATCTTAATGAGAAGGCACTGACTAAACCTGGAGTTTTTAGACGGAAAACCTCCAGAAATTTAGATAATTCTCTAGATGAGACATCATCTTCTCAAGCAAACAAGTTCCCTAGTTTTGAAAATCCAAATGTAACATCATCCCACTTTAGTGGTTCTGAATATGAGACAATGATGCTTCCTAGATAA 1140 0.3991 MIGNCFGALNCCGGKNDPADQSNQQEIATKTFSYNSLRSATRDFHPSSKIGGGGYGVVHKGVLRDGTQVAIKSLSVESKQGTKEFMTEIDIISNIQHPNLVQLIGCCVEGNYRILVYEFLENNSVASSLLGFKSKRVALDWPKRAAICRGTASGLAFLHEEAQPNIVHRDIKASNVLLDKNFDPKIGDFGLAKLFPDNATHISTRVAGTMGYLAPEYALLGQLTRKADVYSFGVLMLEIISGKSSSKAAFGENLLVLVEWTWKLKEENRLLDIVDPELTEYDETEVLRFIKIALFCTQATAHHRPSMKQVIKMLSKEVHLNEKALTKPGVFRRKTSRNLDNSLDETSSSQANKFPSFENPNVTSSHFSGSEYETMMLPR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0522 379 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0522 379 MobiDBLite consensus disorder prediction 341 362 - -
Sto6g0522 379 Gene3D Phosphorylase Kinase; domain 1 12 119 - -
Sto6g0522 379 Gene3D Transferase(Phosphotransferase) domain 1 120 332 - -
Sto6g0522 379 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Sto6g0522 379 Pfam Protein kinase domain 45 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0522 379 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 358 - -
Sto6g0522 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Sto6g0522 379 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 358 - -
Sto6g0522 379 SMART serkin_6 44 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0522 379 CDD STKc_IRAK 50 316 - -
Sto6g0522 379 SUPERFAMILY Protein kinase-like (PK-like) 24 314 IPR011009 -
Sto6g0522 379 MobiDBLite consensus disorder prediction 336 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0522 Sto-Chr6 5654304 5658513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0522 26 370 Receptor kinase-like Gene Family AT1G56120 49.565 8.83e-109 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto6g0522 Pkinase 7.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0522 - - gmx:100785766 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0522 6 5654304 5658513 Sto6g0522 6 5654304 5658513 ECH