Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0516 ATGGCAGAGAAGAAGAACAATAATATCTTACGCAACTTCAATCCAAGTGAGACAAGAGGGAAGATCATCACCTGCAAagcTGCTGTGGTATATGGTCCTGAAGAAGCATTCAAGATAGAAGAAGTGGAAGTTCATCCTCCACAGAAAATGGAGGTTCGAATTAAGATTCTCTTTACTTCTATCTGTCATTCTGATGTTGATGCTTGGAAAGCccagCCGGAGAGTCGCCGGGCTTTCTATCCTCGGATTTTTGGGCATGAAGCTTCTGGGATAGTGGAGAGTGTGGGAGAAGGCGTGAATGACGTGAGAGAAGGAGATTACGTAGTGCCTATCTTCCAAGCCGAATGTGGGGAATGCAAGCTATGCACGTGCGAGAAAACCAACACGTGCGAGAGCGTGAGCTATACCAATACGGTGATGCTTAGCGACGGAAAATCCAGGTTCTACACAACCGACGCTAAACCCATCTTCCATTTCCTCAACACGTCAACTTTCAGCGAGTACACTGTTGTACACTCCGCTTGCGTCGTCAAGCTTCCTTCCGTCGCCGACGACACCCGCATTCTCAAACGCCTTACCTTGCTTAGCTGTGGCGTCACCACCGGAGTTGGAGCTGCTTGGAATGTTGCTAATGTCCATTCTGGTTCAACTGTGGCTATCTTTGGTTTGGGCTCTGTGGGCCTCGCTGTTGCAGAAGGAGCCAGAGCAAGAGGTGCATCCAAAATAATAGGGATTGACATCAACCCTCACAAATTCATTAAAGCTCAAGCTATGGGGGTGACTGAGTTCATAAACCCAAAGGATGAGGAGAAGCCTGTATATGAGaaaataagagaaatgaGTGAAGGAGGAGTACACTACAGCTTTGAGTGTTCTGGAAATTCTGATGTTCTCCGTGATGCCTTCTTATCTTCTCATGAGGGTTGGGGTTTGACAGTGATAGTGGGAATTCATTTAACACCAAAGACGCttccaatacacccaatggagCTATTTTATGGTCGCAGAATTGTGGGTTCAATGTTTGGAGGCTTCAAAGGCAAATCTCAGCTTCCTCATTTTGCTCAACAATGTCTTCAAGGGGTGGTGAAGCTGGATGATTTCATCACTCATGAACTCCCATTCCATGACATCAACGAAGCCTTTCAGCTTTTGATTGCCGGAAAGTCACTCAGATGTATTCTTCACCTTTAA 1194 0.4472 MAEKKNNNILRNFNPSETRGKIITCKAAVVYGPEEAFKIEEVEVHPPQKMEVRIKILFTSICHSDVDAWKAQPESRRAFYPRIFGHEASGIVESVGEGVNDVREGDYVVPIFQAECGECKLCTCEKTNTCESVSYTNTVMLSDGKSRFYTTDAKPIFHFLNTSTFSEYTVVHSACVVKLPSVADDTRILKRLTLLSCGVTTGVGAAWNVANVHSGSTVAIFGLGSVGLAVAEGARARGASKIIGIDINPHKFIKAQAMGVTEFINPKDEEKPVYEKIREMSEGGVHYSFECSGNSDVLRDAFLSSHEGWGLTVIVGIHLTPKTLPIHPMELFYGRRIVGSMFGGFKGKSQLPHFAQQCLQGVVKLDDFITHELPFHDINEAFQLLIAGKSLRCILHL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0516 397 Gene3D - 28 392 - -
Sto6g0516 397 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 85 99 IPR002328 GO:0008270|GO:0016491
Sto6g0516 397 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 18 396 - -
Sto6g0516 397 Pfam Zinc-binding dehydrogenase 226 344 IPR013149 -
Sto6g0516 397 Pfam Alcohol dehydrogenase GroES-like domain 51 178 IPR013154 -
Sto6g0516 397 Gene3D - 202 340 - -
Sto6g0516 397 SUPERFAMILY GroES-like 347 396 IPR011032 -
Sto6g0516 397 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 192 361 IPR036291 -
Sto6g0516 397 SUPERFAMILY GroES-like 18 221 IPR011032 -
Sto6g0516 397 PANTHER ALCOHOL DEHYDROGENASE 18 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0516 Sto-Chr6 5600077 5610974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0516 51 385 Monolignol Biosynthesis Gene Families AT2G21730 25.714 3.82e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0516 K00001 - gmx:100785720 595.119