Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0514 ATGGGTACTCCTCACCAGCACCAGCACGAGGCATGCCTCTTGGAGAATGGCAACAACAACCCCACGGGTTTGAGCAGAGAGTCGAGGCATGGCCGAACTGCTCACAACATGTCATCCTCTTCCCTGCGCAAGAAATCTGACCTAACCCTCGTTTCCAAGGTCCGATATGGCTTGCTCAGGAACTTGCTTGTCAATTTCCAAGAGGTCATTCTTGGGACCAAGCTCTCCGTTCTCTTCCCTGCGATTCCCGTCGCGATCATCGCCCATGTCTATGGGTTTGCAAGACCTTGGGTTTTTGCTTTGAGCTTACTTGGGCTTACTCCACTTGCTGAACGTGTCAGCTTCTTGACAGAACAATTAGCTTATTACACAGGTCCCACAGTCGGCGGATTTCTAAATGCAACATGTGGAAATGTCACAGAGCTCATAATAGCAATATTTGCTCTCAGCAATTATAAAATAGCTGTGGTCAAGTATTCTCTCTTGGGTTCAATCCTTTCAAACCTTCTTCTGGTTCTTGGAACCTCTCTCTTCTGTGGTGGAATAGCAAACCTTCGACTAGAACAAAAATATGACAGAAAACAGGCAGATGTGAACTCACTTATGCTGCTGTTGGCATTATTATGCCACTTGCTGCCTATGTTGTTCAGATATTCCGGTGCCTCAGCTGGTCTTGTTACAGACCCATCTCTCCCCTTGTCAAGAGCTGCAAGCATTACAATGCTGATTGCATATTTTGCTTATCTTATCTTTCAACTGTGGACACACCGCCAATTATTTGAAGCAGAGGATGAAAAAGACAATGATGATAATGTTGCAGAAGAAGCAGCAGTGATAGGATTCTGGAGTGGGTTTGCTTGGCTGGTTGGAATGACTGTACTCATTGCTTTCTTGTCTGAATACGTGGTCCAGACAATTGAGGATGCATCGGAATCATGGGGTCTTTCTGTCAGCTTCCTTAGCATAATTTTGCTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAATAAGCTGGACATCTCATTAGGTGTTGCTTTAGGTTCTGCAACTCAAATCTCCATGTTTGTGGTTCCCCTGTGCGTGGTCATTGCTTGGATAATGGGTATCAATATGGACCTTAACTTAAATCTTCTTGAAACTGGCTCTCTTGCTATGGCAATTTTAACTACAGCATTCACATTACAGGATGGAACTTCTCACTACATGAAGGGCCTTGTTCTTCTGCTCTGCTACATTGCTATTGGGGCATGCTTTTTTGTTCAGAAAACACCATTCAATCATGCTGATGTTAGTAACATAACCCTTAAACAAGCAACTGAAGCAGTTTTTAGAGCTTAA 1362 0.4398 MGTPHQHQHEACLLENGNNNPTGLSRESRHGRTAHNMSSSSLRKKSDLTLVSKVRYGLLRNLLVNFQEVILGTKLSVLFPAIPVAIIAHVYGFARPWVFALSLLGLTPLAERVSFLTEQLAYYTGPTVGGFLNATCGNVTELIIAIFALSNYKIAVVKYSLLGSILSNLLLVLGTSLFCGGIANLRLEQKYDRKQADVNSLMLLLALLCHLLPMLFRYSGASAGLVTDPSLPLSRAASITMLIAYFAYLIFQLWTHRQLFEAEDEKDNDDNVAEEAAVIGFWSGFAWLVGMTVLIAFLSEYVVQTIEDASESWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIMGINMDLNLNLLETGSLAMAILTTAFTLQDGTSHYMKGLVLLLCYIAIGACFFVQKTPFNHADVSNITLKQATEAVFRA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0514 453 MobiDBLite consensus disorder prediction 1 40 - -
Sto6g0514 453 MobiDBLite consensus disorder prediction 12 27 - -
Sto6g0514 453 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 7 439 IPR004713 GO:0006812|GO:0008324|GO:0016021
Sto6g0514 453 Gene3D - 271 427 IPR044880 -
Sto6g0514 453 Gene3D - 126 266 IPR044880 -
Sto6g0514 453 TIGRFAM caca2: calcium/proton exchanger 61 427 - -
Sto6g0514 453 TIGRFAM cax: calcium/proton exchanger 80 427 IPR004798 GO:0006816|GO:0015369
Sto6g0514 453 Pfam Sodium/calcium exchanger protein 284 421 IPR004837 GO:0016021|GO:0055085
Sto6g0514 453 Pfam Sodium/calcium exchanger protein 97 254 IPR004837 GO:0016021|GO:0055085
Sto6g0514 453 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 7 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0514 Sto-Chr6 5584511 5588454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0514 15 432 Antiporters AT2G38170 72.877 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0514 K07300 - gmx:100782052 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0514 6 5584511 5588454 Sto1g2272 1 30722746 30727091 CCT
Sto6g0514 6 5584511 5588454 Sto6g0514 6 5584511 5588454 ECH