Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0501 CTGCAATTTCTTAGGGTTTTGCGAGATCAATCTCCGGCTGCCGTCGCCAGGGAGGACGTCAAATCGAACTTCTCCGGCCACGATCACGGCAAGAGGGACTCCAACGCTGCCAAGAAGAAGGCTCCGATCACGGTGCTTGCGGACGTGGCTAAGGAGAATATTGAGGAGAAGTACTTGGTGGATCGGGAGCTTGGTCGAGGGGAGTTCGGGGTGACTTATCTGTGTATTGAGCGCGAAACCAGGGAGCTTCTAGCTTGCAAGAGTATTTCCAAGCGGAAGCTTAGGACTGCGGTGGATATTGAGGATGTGAGGCGTGAGGTTGCTATAATGAAGCACCTGCCTAAGAGCTCCAGCATTGTGAGCTTGAAGGAAGCGTGTGAGGATGACAATGCTGTGCATTTAGTCATGGAGTTGTGTGAGGGTGGTGAGCTGTTTGATCGGATTGTGGCACGTGGCCATTATACGGAGCGAGCTGCTGCTGCGGTTACGAGGACGATTGTCGAAGTTGTACAACTTTGTCACAAACATGGGGTTATTCACAGGGACTTGAAACCGGAGAACTTTTTGTTTGCCAATAAGAAAGAGAATTCGCCTTTGAAGGCTATCGATTTTGGCCTCTCTATATTCTTCAAGCCAGGTAACAATTTCAACAACGGAATGTGGATACTTGTTGTACCTTGTGGAAACATTAATCTCAGCAATAAGAACTGTCAAGTGATCAGTTATCCTTTGGAGAAGGGCCATGAAGTATGGTCAAAAGCCCTAGGCCCAACACCACCTGGTGAGAGATTCTCAGAAATTGTTGGAAGTCCATATTATATGGCCCCAGAGGTACTCAAGCGAAACTATGGGCCGGAAATAGATATATGGAGTGCAGGAGTAATTCTATATATCTTGTTGTGTGGCGTTCCCCCATTTTGGGCAGgttGTTTGCTTCTGAACTTCTGTCCTGTATTGATCAGCTCATGGGAaagcattttattttatcacgAGATTAATTCTAATGCAGAATCTGAACAAGGGGTTGCACAGGCTATTCTTCGAGGACTCATAGATTTCAAAAGGGAACCTTGGCCCAGTATTTCAGAAAGTGCTAAAAGTCTTGTTAGACAAATGTTAGAACCAGATCCTAAGCTTCGACTAACGGCCAAGCAAGTGCTTGAACATCCTTGGCTCCTAAATGCTAAGAAGGCTCCTAATGTCCCTCTTGGCGATGTAGTCAAGTCTAGGCTTAAGCAGTTTTCAATGATGAACAGATTCAAAAGAAAAGCCCTGAGGGTCATTGCTGATTTCTTATCCACTGAAGAAGTTGAGGACATCAAAGAAATGTTCAAGAAGATGGACAGTGATAATGATGGTATTGTTTCCGTTGAAGATCTAAAGGCTGGATTTCAAAATTTTGGATCTCAACTTGCTGAGTCTGAAGTTCAGATGCTTATTGAAACTGTAAATACTAATGGGAAGGGAACACTTGACTACGGAGAATTTATTGCTGTATACCTGCACTTAAAACGGATGGCTAACGATGAGCATCTTCGCAAAGCTTTCTCCTATTTTGACAAGGATGGGAATGGCTATATTGAACCTGATGAGCTGCGGAACGCCTTGACAGAAGATGGTGCAGATGATTGTACAGATGTAGCAAATGACATTTTCCAGGAAGTAGACACGGACAAGGATGGGCGGATCAGCTACGACGAATTCGTGGCCATGATGAAAACCGGAACCGATTGGAGAAAAGCTTCTAGGCATTATTCACGAGGGAGATTCAACAGCTTGAGCTTAAAGTTGATGAAAGATGATGGTGCCTATTTACCAGGTGCTGTGCGAGTCAGGAAGGATTGCACTCACGCACACGCCCTTGTTACTTCTATAAAATATGGTGCCTTGGAGCCATTGGTGTGA 1905 0.4483 LQFLRVLRDQSPAAVAREDVKSNFSGHDHGKRDSNAAKKKAPITVLADVAKENIEEKYLVDRELGRGEFGVTYLCIERETRELLACKSISKRKLRTAVDIEDVRREVAIMKHLPKSSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGNNFNNGMWILVVPCGNINLSNKNCQVISYPLEKGHEVWSKALGPTPPGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAGCLLLNFCPVLISSWESILFYHEINSNAESEQGVAQAILRGLIDFKREPWPSISESAKSLVRQMLEPDPKLRLTAKQVLEHPWLLNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSTEEVEDIKEMFKKMDSDNDGIVSVEDLKAGFQNFGSQLAESEVQMLIETVNTNGKGTLDYGEFIAVYLHLKRMANDEHLRKAFSYFDKDGNGYIEPDELRNALTEDGADDCTDVANDIFQEVDTDKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDDGAYLPGAVRVRKDCTHAHALVTSIKYGALEPLV 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0501 634 ProSiteProfiles Protein kinase domain profile. 58 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0501 634 ProSitePatterns EF-hand calcium-binding domain. 556 568 IPR018247 -
Sto6g0501 634 SMART serkin_6 58 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0501 634 CDD EFh 511 573 IPR002048 GO:0005509
Sto6g0501 634 ProSitePatterns EF-hand calcium-binding domain. 448 460 IPR018247 -
Sto6g0501 634 ProSitePatterns Protein kinases ATP-binding region signature. 64 87 IPR017441 GO:0005524
Sto6g0501 634 PANTHER SERINE/THREONINE-PROTEIN KINASE 260 308 - -
Sto6g0501 634 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 13 14 218 - -
Sto6g0501 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Sto6g0501 634 ProSiteProfiles EF-hand calcium-binding domain profile. 471 506 IPR002048 GO:0005509
Sto6g0501 634 Gene3D - 401 576 - -
Sto6g0501 634 CDD STKc_CAMK 57 391 - -
Sto6g0501 634 MobiDBLite consensus disorder prediction 21 37 - -
Sto6g0501 634 ProSiteProfiles EF-hand calcium-binding domain profile. 543 578 IPR002048 GO:0005509
Sto6g0501 634 ProSiteProfiles EF-hand calcium-binding domain profile. 435 470 IPR002048 GO:0005509
Sto6g0501 634 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 13 260 308 - -
Sto6g0501 634 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 13 335 589 - -
Sto6g0501 634 SMART efh_1 511 539 IPR002048 GO:0005509
Sto6g0501 634 SMART efh_1 439 467 IPR002048 GO:0005509
Sto6g0501 634 SMART efh_1 475 503 IPR002048 GO:0005509
Sto6g0501 634 SMART efh_1 547 575 IPR002048 GO:0005509
Sto6g0501 634 SUPERFAMILY Protein kinase-like (PK-like) 56 398 IPR011009 -
Sto6g0501 634 ProSitePatterns EF-hand calcium-binding domain. 520 532 IPR018247 -
Sto6g0501 634 Gene3D Transferase(Phosphotransferase) domain 1 144 400 - -
Sto6g0501 634 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 218 - -
Sto6g0501 634 PANTHER SERINE/THREONINE-PROTEIN KINASE 335 589 - -
Sto6g0501 634 SUPERFAMILY EF-hand 421 598 IPR011992 -
Sto6g0501 634 MobiDBLite consensus disorder prediction 18 37 - -
Sto6g0501 634 Gene3D Phosphorylase Kinase; domain 1 59 143 - -
Sto6g0501 634 ProSiteProfiles EF-hand calcium-binding domain profile. 507 542 IPR002048 GO:0005509
Sto6g0501 634 Pfam EF-hand domain pair 438 500 IPR002048 GO:0005509
Sto6g0501 634 Pfam EF-hand domain pair 510 573 IPR002048 GO:0005509
Sto6g0501 634 Pfam Protein kinase domain 60 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0501 Sto-Chr6 5456777 5462255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0501 33 609 EF-hand Containing Proteins AT1G74740 61.005 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto6g0501 Pkinase 5.8e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0501 K13412 - zju:107430894 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0501 6 5456777 5462255 Sto6g0501 6 5456777 5462255 ECH