Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0500 ATGATGAATATGGATGTGAGTAGTAGCACTAGCAGCGAGAGCAGGTTGGGTCAATGGAGCATGGAGGAGACGAAGGAGTTGGTAGGGATAAGAGCAGAGTTGGATCAGAGTTTCATGGAGACCAAGAGGAATAAGCAGTTATGGCAACTCATCTCTAACTCCATGAGACTCAAAGGCTACCTTCGAAGTCCTGAACAGTGCAAGTGCAAGTGGAAAAACCTCGTCACTAGGTACAAGGGATGTGAAACGGGGGAGTCAGAAAGTACAAAGCAACAATTCCCATTCTACAACGAACTACAAACCATTTTCACATCAAGAATGCAGAGAATGGTAATGGCAGAAGCAGAAGGATCGGGAGGAGGATCAAGGAAGAACAAAGCAGTAGTAGTATCatcagaagaggaggaggaagatcaAGACATGCAGCAGCTGGAGGATGAAGATAACATGAGCATAGAAAGagaccatcatcatcatcgtagaacaaagaagatgaaaaagagcAAGAATAATGATAGTAGTAATAATCATGATGGGGGGTTGAAGGAGATAGTGGAGGAGTTGATGAGGCAGCACATGAGAATGGAGTCAGAATGGATGGAAGCAGTTGAGGCgagagagaaggagaggaaggagagggagagggagtgGAAGGAGACAATGGAGGCTCTGGAGAAAGAGAGGATGATGATGGATCAGAGATGGAGGGAGAGGGAGGAGCAAAGGAGGGTTAGGGAAGAAGCTAGGGCTCAGAGAAGAGATGCTCTCATTACTGCCCTTCTTAATAAGCTCACTAGACAAGACAATATGACGATGGCCATGAGACAATAG 831 0.4007 MMNMDVSSSTSSESRLGQWSMEETKELVGIRAELDQSFMETKRNKQLWQLISNSMRLKGYLRSPEQCKCKWKNLVTRYKGCETGESESTKQQFPFYNELQTIFTSRMQRMVMAEAEGSGGGSRKNKAVVVSSEEEEEDQDMQQLEDEDNMSIERDHHHHRRTKKMKKSKNNDSSNNHDGGLKEIVEELMRQHMRMESEWMEAVEAREKERKEREREWKETMEALEKERMMMDQRWREREEQRRVREEARAQRRDALITALLNKLTRQDNMTMAMRQ 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0500 276 PANTHER - 13 268 - -
Sto6g0500 276 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 13 268 - -
Sto6g0500 276 Coils Coil 207 234 - -
Sto6g0500 276 Gene3D - 19 80 - -
Sto6g0500 276 ProSiteProfiles Myb-like domain profile. 11 75 IPR001005 -
Sto6g0500 276 MobiDBLite consensus disorder prediction 114 180 - -
Sto6g0500 276 Pfam Myb/SANT-like DNA-binding domain 18 101 IPR044822 -
Sto6g0500 276 CDD GT1 18 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0500 Sto-Chr6 5435682 5437762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0500 5 270 Trihelix Transcription Factor Family AT2G38250 55.805 6.04e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto6g0500 Myb_DNA-bind_4 8.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0500 - - mnt:21399455 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0500 6 5435682 5437762 Sto6g0500 6 5435682 5437762 ECH