Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0475 ATGCCCAGACTCAGATGGACTCCTGATCTCCATCTCCGATTTGTTCATGCTGTTCAAAGGCTTGGAGGAGAAGAGAGAGCAACACCAAAGTTGGTTCTCCAATTAATGAACATCAAAGGCTTGAGTATTGCACATGTCAAGAGCCATTTACAGATGTATAGGAGCAAGAAGGTAGATGATCCAAACCAAGTATTGGCTGAACATAGGCATCATCTTGTAGAAAATGGAGACAGAAATATTTACAATCTCAGCCAACTTCCCATGCTTCAAGGTTATAATTATCCAATCCAATCTTCAACCTTCAGATATGGATATGGAGATGCTTCATCTTTTGGTGTCTACGACAAAATGTTCCATAGACCTTTCTCGGGTCGAAATCGGATCGATGAACCCGGATCGTCGAAGGGGCTCCATAGCATTTTCCGGGTGGATACTTCGAATTTTCTGAagcaatcatcatcatcatcaagtaAACTCTATGAATTACCACAAGATGATCATAATCAAGTTCTCTCATTTGGTTCACAGTATGTACATCATGATCATCATCAACCATTAATAAGAGCCcaagatcatcatcatcagctaATTACACCCATTATGAAGGATCATCATCAAGAGGCACTAATTACATCAAAGACACTAAAAAGGAAGGCtatggatgatgatgatcacCATCATGATCTTGATTTGGATCTATCACTGAAATTAAACTCAagagttgatgatgatgatattggtgagaagaagatgaagaatgaagaagcaaataattttttggaggagaataataattatgatgAAGTTGATAGCAATCTCTCACTGTCTTTGTACTCTCAAATTTCTTCCTCttctaattataataataataataatgttaggGTGAAAAGCAGGTTGAAGTTgaaggaaggagaaggagaagaagagtgtaataataataataaggaaaggGCTAGTACTCTGGATCTGACTATATGA 978 0.3037 MPRLRWTPDLHLRFVHAVQRLGGEERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVDDPNQVLAEHRHHLVENGDRNIYNLSQLPMLQGYNYPIQSSTFRYGYGDASSFGVYDKMFHRPFSGRNRIDEPGSSKGLHSIFRVDTSNFLKQSSSSSSKLYELPQDDHNQVLSFGSQYVHHDHHQPLIRAQDHHHQLITPIMKDHHQEALITSKTLKRKAMDDDDHHHDLDLDLSLKLNSRVDDDDIGEKKMKNEEANNFLEENNNYDEVDSNLSLSLYSQISSSSNYNNNNNVRVKSRLKLKEGEGEEECNNNNKERASTLDLTI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0475 325 Pfam Myb-like DNA-binding domain 4 54 IPR001005 -
Sto6g0475 325 MobiDBLite consensus disorder prediction 306 325 - -
Sto6g0475 325 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 2 57 IPR006447 GO:0003677
Sto6g0475 325 Gene3D - 1 58 - -
Sto6g0475 325 SUPERFAMILY Homeodomain-like 2 56 IPR009057 -
Sto6g0475 325 PANTHER - 1 325 - -
Sto6g0475 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 58 IPR017930 -
Sto6g0475 325 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 325 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0475 Sto-Chr6 5157812 5159404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0475 1 59 G2-like Transcription Factor Family AT2G42660 84.746 5.54e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto6g0475 Myb_DNA-binding 1.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0475 - - aip:107628479 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0475 6 5157812 5159404 Sto6g0475 6 5157812 5159404 ECH