Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0473 ATGGAACCTGAGATTCTTCAGTCTTCATGGCCACTCTATGAAGCCACAAGTTCAATTTTTGATCAAGTTGAAAGTTATTTAAACTTGGATGATACTTCCTCTGAGCTTTCCTCCATCATCCCCTTTTCTTCTACCATATTCTCCAATCATCATTTTCATCACCcacttgatgatgatgatgaacatACCTTTCAACTCCCATCATTGACAGAAGATTTCTCTATGGATCTTGATGcttttgatccctctttgagttCCCAGATTCTGGGTTTCCATGGATACCCAGAAGAGAGTACTGAAGGAAGCTTTCCATCACTCTCCTTCTCCTCTGAGGGAGAAGTTTCTTGGAGTCCTACCCCATCCATGAAATCAGACTTATCCAATACAGTACTATTACAACCACAACCATCACTACTGACCTTACCACAAGAAGACATGGAAATGGAGACTCAATTGAGTCTTCCTCATCTTCTGGAGGCCATTGGAGAAGCCATGGAGCAAGGACAGAACACACTAGCACAAGTGATTCTGAAATGCATCAGCCAGAAAGTCAACCCACTTGGTGACCCTCTGGAGCGTATTGCATTCAAATTGTGCTCAGATCACAATCTCAAAGACCAAGGGCATTTCATCAAACAGGAGGCGTGCAAGAACTTGAACCAAATTTTCAAGGCTTTCTACCAAGGCCTCCCACATGGCAAATTTGCTCATTTCACAGCCAATTCAGCAATTCTAAACTCTATACCACAGGATTCAGATGTCATACACATAATAGACCTTGATTTGGGAGAAGGTGTCCAATGGCCTCCTCTGATAGAGGCCATTGCACACCAACACAAGACATTGAAACTGACCTCAATCAaatgggaagaagaagatgaggagAGCCCTGAATCTGACTGCGTTTCCACCCAATGGAAGTTTGAAGAAACCAGAAGGAACCTCTATGAGCATGCCAAATCATGTGGGTTGAAATTGAAGGTGGAGGAAAAGAGTATTGAAGAATTGGTCACAGAGCTTAAGAAATTGAACAAAAGGGGTGGAAAAGGCAAGACAAATTTCATGGCATTCAATTGCATGGTGGGTCTACCACATATGGGGAGGGTGAGAAGTACAAGAAAAGTCTCAGAATTTGTGAGGGTAGCTAAGGATTTGATCAAAAGCTCTACTTCCACAAAGGGAATCATAACTTATGGTGATGGACAAACATGTGAGAAACTCAGAAATTGCATGGATTTCAGATCATTCTTTCATGGGAATGTGGTGCACTACCATGCTTTGCTAGAATCAATAGAATCAAGTTTCACAAGTAGATTCACAGAGGCAAGAACAGCAATGGAATGCCTATTTGTGGATCCTTATGTGTCCTCTCTGGGTTGGTTTCAGAAATGGAAGGACATGAGAGAATGTTTGAATCTTGAAGAagaattagggttagggttagaaGGTCAAATCTTGAGGGAAGGGGTATTAATGGAAATTGGAGAAATGATAAGAGGAAGTGAAGGATTGTATGAAGCTAAGATTGAAAGAAAGAATGGGAATGAAATGGTTTTACAATGGAAAGGAACAGAGTTAGCACAGGGTCATTGCGTGGGTACTACTGACAGACAAGAACAGGCTGCTTATCCCCCACAGCCTGCCTTTGATCTTTTAGATGATAGACACGTGCCAACCCCTGATGTGCTCGTGAACGAAGCATGGCCTGTCCTAGCCAGTCTATCCCTACCCTCTGGactacaaaataattttataacattTGGACAATACATTGAATTGGGCAGAtctctcaagaacacctgcaAGCAAGCCGCCACTAGAATATGTGCCATCTCCTCCAATCCATATTCTATCAACAACATTGCATCCTCCATATCACAAACCAAAGATGCTAAATGA 1899 0.3965 MEPEILQSSWPLYEATSSIFDQVESYLNLDDTSSELSSIIPFSSTIFSNHHFHHPLDDDDEHTFQLPSLTEDFSMDLDAFDPSLSSQILGFHGYPEESTEGSFPSLSFSSEGEVSWSPTPSMKSDLSNTVLLQPQPSLLTLPQEDMEMETQLSLPHLLEAIGEAMEQGQNTLAQVILKCISQKVNPLGDPLERIAFKLCSDHNLKDQGHFIKQEACKNLNQIFKAFYQGLPHGKFAHFTANSAILNSIPQDSDVIHIIDLDLGEGVQWPPLIEAIAHQHKTLKLTSIKWEEEDEESPESDCVSTQWKFEETRRNLYEHAKSCGLKLKVEEKSIEELVTELKKLNKRGGKGKTNFMAFNCMVGLPHMGRVRSTRKVSEFVRVAKDLIKSSTSTKGIITYGDGQTCEKLRNCMDFRSFFHGNVVHYHALLESIESSFTSRFTEARTAMECLFVDPYVSSLGWFQKWKDMRECLNLEEELGLGLEGQILREGVLMEIGEMIRGSEGLYEAKIERKNGNEMVLQWKGTELAQGHCVGTTDRQEQAAYPPQPAFDLLDDRHVPTPDVLVNEAWPVLASLSLPSGLQNNFITFGQYIELGRSLKNTCKQAATRICAISSNPYSINNIASSISQTKDAK 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0473 632 Pfam GRAS domain family 156 526 IPR005202 -
Sto6g0473 632 ProSiteProfiles GRAS family profile. 145 533 IPR005202 -
Sto6g0473 632 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 32 527 - -
Sto6g0473 632 Coils Coil 326 346 - -
Sto6g0473 632 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 527 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0473 Sto-Chr6 5135952 5146160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0473 149 276 GRAS Transcription Factor Family AT3G03450 31.343 1.29e-13 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto6g0473 GRAS 7.8e-32 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0473 - - gmx:100784347 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0473 6 5135952 5146160 Sto6g0473 6 5135952 5146160 ECH