Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0463 atggcTGAAAGAGGGAAGAAAGGATGCATTAAGACTAGTAAGGGCCCATGGATAGTTAGAAGAATCACCAAAGATGGTGTTATTAGTCAACATTACCGATTTCCAAGTGAACGTGAGAGGCAAAATAATAAGGCAAGGGAGCAAAAGAGACGATCAATAGCTCGAAGAATATTTGCTGGTCTTAAAGCACATGGAAACTATATACTTCCTAAACATGCAGATACTAATGATTTGCTTAAGGCATTGTGTGAAGAAGCTGGATGGATTGTTGAAGAAGACGGCACCATTtataaaaagGTTGCACCGAACAATGGTATCCACAAACACACATGTGTCCTCCTTCGTGTTCCCCGGCGGCACGTCCACCGCGTACGACTCCACCACCACCGTCCGGTCGCCGTCGCCGCGGTGCAAGGTGGTGACGGAGCGGTAATTGGCGAGGCGGTGGTCCCCGCCGATGACGCTGAAGCCGAGGACGTGGCACTCGTCGTCGAGGATGTCGAGGCGCTCGGTGCTGGTCGCAGCGGGGAGGCCAGAGATGATGTGGACCTGACGGAGAGTACCGACGTCGCCGTCGCCAACGAGGACGCGGCAGGTCTTGACGAAGTTCTTGTAGGCCTGGGGGTTGTCGAATCGGCGGACGACGGACCAGACGGTGGAGAGAGGAGCGGAGATCTGTTGAGTGAGAGCGGAACAGCACTGGTTGGGACGGAGGAAGTGGGCGTGGTAGGGGGCAACGGTGGGAGGAGGAAGAGGGTGGTGAAGATCTTGGAGAAGgcaatgagaatgagaatgagaagcgTGGTTGATTGTTtggaggaagaaggaagaagaattgGGAGGATTTGGAAGCATGATTTTTAA 864 0.4977 MAERGKKGCIKTSKGPWIVRRITKDGVISQHYRFPSERERQNNKAREQKRRSIARRIFAGLKAHGNYILPKHADTNDLLKALCEEAGWIVEEDGTIYKKVAPNNGIHKHTCVLLRVPRRHVHRVRLHHHRPVAVAAVQGGDGAVIGEAVVPADDAEAEDVALVVEDVEALGAGRSGEARDDVDLTESTDVAVANEDAAGLDEVLVGLGVVESADDGPDGGERSGDLLSESGTALVGTEEVGVVGGNGGRRKRVVKILEKAMRMRMRSVVDCLEEEGRRIGRIWKHDF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0463 287 PANTHER BETA-AMYLASE 8-LIKE 12 108 - -
Sto6g0463 287 Pfam BES1/BZR1 plant transcription factor, N-terminal 33 102 IPR008540 -
Sto6g0463 287 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 12 108 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0463 Sto-Chr6 5070405 5075356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0463 52 99 BZR Transcription Factor Family AT1G19350 64.583 2.06e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Sto6g0463 BES1_N 3.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0463 - - rcu:8263117 154.066