Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0459 ATGGGGAAGAACAATGTCCAAGGCTGCTTCTTTTTCATCCTGGTTCTTCAAGCTCTATCACTCACACTTCAGCCGGTCTCGGGAGGCCATTTGTGGGATGGGGTTATTGTGACACAAGCGGATTTTCAAGCTCTAAGAGCTATAAAGCATGAAATGATTGATTCCAATGGGGTTCTGAGGAGCTGGAATGACAGTGGGATTGGAGCTTGTTCAGGTGGGTGGGCAGGAATTAAGTGTGTGAATGGACAGGTTATTGCAATCCAGCTTCCATGGAAGGGATTGGGTGGGAGAATCTCagagaaaataggacagcttcAAGCTCTTAGGAAGCTCAGTCTACACGACAATGTCCTAAGTGGTCCTGTCCCTTGGTCTCTTGGCTTCCTTCCTAATCTCAGAGGACTCTATCTCTTCAACAATAGGCTTTCAGGTTCTATTCCTCCTTCCATTGGGAATAATTCCCCAGTGCTTCAATCTATTGATATTAGCAATAATGCTCTCACAGGTATAATCCCTCCTAGCTTAGCAAATTCCACTAGATTATATAGACTCAATTTGAGCTTCAATTCTCTTTCTGGGTCCATTCCCAAAAGTTTCACTCTGTCTTCTTCTTTGACTATTCTTGCTCTTCAACACAACAATCTATCTGGGTCTATCCCAGATTCTTGGGGTGGTGGTGGGATGGGaaaaaacaaaactttccaactTCAAATCTTGACCCTTGATCACAATCTCATTTCTGGTACCATTCCAGTTTCTTTAAGTAAGATGGGTTTGCTTCAAGAGATCTCTTTGAGCAATAATAAGATTGTGGGGTCTATTCCAAGTGAACTAGATGGGCTTTCTAGGCTTCAGATTCTTGATCTATCAAACAATGCCATCAATGGTAGCTTTCCAGATACTTTTGATAAATTCCAAAACCTTACAGTGCTTAACCTGAAGAGCAACAAGCTTGAGGGTGAAATCCCATCAACAATTGGGAACATATCAGGAATTAACTCAATTGATTTCTCTGAAAACAAATTTGTGGGGGAGATTCCAGATTCATTTACCAAACTTGCAAATCTGAGTTCTTTCAATGTTTCTTACAACAATCTGTCTGGTCTTGTCCCATCCCTCCTTTCCAAAAAATTCAATTCAAGCTCTTTTGCTGGGAATCTTCAGCTCTGTGGGAAAAGAGCTGCCTCTAAAGGAAAGAATGGAAAAACAACAAAAGCAGCCACTGCTACTACTGGTGCTGCTAGAAATGTAGAAAAAGGTGATGAAGTTGAATCAGGAGGGGAAGCAGGAGGGAAACTAGTACACTTTGATGGGCCATTTGTGTTTACAGCTGATGATCTCTTGTGTGCCACTGCTGAGATAATGGGAAAAAGTGCTTATGGAACAGCATACAAGGCAACACTAGAGGATGGGAACCAAGTTGCAGTGAAGAGGTTGAGGGAGAAGACAACCAAAGGGCAGAAGGAGTTTGAAACTGAGGTTGCTGCACTTGGCAAGATTAGACACCCAAATCTCTTGGCACTTAGAGCATACTACTTGGGACCAAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGCCCAAAGGAAGTCTTGCATCATTTCTTCATGCTAGGGGACCAGAAATTGTCATAGACTGGCCAACAAGAATGAGAATAGCCCTTGGAGTGACACGTGGCTTGTGCTACCTCCACACCCAAGAGAACATAGTCCATGGGAATCTCACATCTAGCAACATACTTTTGGATGAGCAAACAAATGCCCACATCACAGACTTTGGTCTCTCAAGGCTTATGACAACTTCTGCAAACACCAACATCATAGCCACTGCAGGAAGCCTTGGTTACAATGCACCAGAGCTCACAAAGACCAAGAAGCCAAGCACAAAAACTGATGCTTACAGCCTTGGAGTCATCATTTTGGAACTCTTGACTGGAAAACCACCTGGTGAGCCCACCAACGGCTTGGACTTGCCTCAGTGGGTGGCTTCCATAGTGAAGGAGGAATGGACAAATGAAGTGTTTGATTTGGAGCTCATGAGGGATGCACCAGCCATAGGTGATGAGCTTCTCAATACTCTGAAATTGGCTCTGCATTGTGTGGACCCTTCTCCTTCAGCTAGGCCTGAAGTTCAGCAGATTCTGCAGCAATTGGAGGAGATAAAGCCAGACTTGGCTGATGATGGAGCTAAAGCAGCAGCACCAACTTCTGAATAA 2214 0.4313 MGKNNVQGCFFFILVLQALSLTLQPVSGGHLWDGVIVTQADFQALRAIKHEMIDSNGVLRSWNDSGIGACSGGWAGIKCVNGQVIAIQLPWKGLGGRISEKIGQLQALRKLSLHDNVLSGPVPWSLGFLPNLRGLYLFNNRLSGSIPPSIGNNSPVLQSIDISNNALTGIIPPSLANSTRLYRLNLSFNSLSGSIPKSFTLSSSLTILALQHNNLSGSIPDSWGGGGMGKNKTFQLQILTLDHNLISGTIPVSLSKMGLLQEISLSNNKIVGSIPSELDGLSRLQILDLSNNAINGSFPDTFDKFQNLTVLNLKSNKLEGEIPSTIGNISGINSIDFSENKFVGEIPDSFTKLANLSSFNVSYNNLSGLVPSLLSKKFNSSSFAGNLQLCGKRAASKGKNGKTTKAATATTGAARNVEKGDEVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFETEVAALGKIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGPEIVIDWPTRMRIALGVTRGLCYLHTQENIVHGNLTSSNILLDEQTNAHITDFGLSRLMTTSANTNIIATAGSLGYNAPELTKTKKPSTKTDAYSLGVIILELLTGKPPGEPTNGLDLPQWVASIVKEEWTNEVFDLELMRDAPAIGDELLNTLKLALHCVDPSPSARPEVQQILQQLEEIKPDLADDGAKAAAPTSE 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0459 737 SUPERFAMILY L domain-like 74 375 - -
Sto6g0459 737 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 303 398 - -
Sto6g0459 737 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 415 726 - -
Sto6g0459 737 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 5 323 - -
Sto6g0459 737 ProSiteProfiles Protein kinase domain profile. 449 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0459 737 CDD STKc_IRAK 455 720 - -
Sto6g0459 737 Pfam Leucine rich repeat 235 294 IPR001611 GO:0005515
Sto6g0459 737 Pfam Leucine rich repeat 156 215 IPR001611 GO:0005515
Sto6g0459 737 Pfam Leucine rich repeat 307 366 IPR001611 GO:0005515
Sto6g0459 737 SMART LRR_typ_2 257 280 IPR003591 -
Sto6g0459 737 SMART LRR_typ_2 281 304 IPR003591 -
Sto6g0459 737 SMART LRR_typ_2 305 329 IPR003591 -
Sto6g0459 737 SMART LRR_typ_2 129 153 IPR003591 -
Sto6g0459 737 SMART LRR_typ_2 353 376 IPR003591 -
Sto6g0459 737 SUPERFAMILY Protein kinase-like (PK-like) 453 723 IPR011009 -
Sto6g0459 737 Gene3D Ribonuclease Inhibitor 230 406 IPR032675 -
Sto6g0459 737 PRINTS Leucine-rich repeat signature 157 170 - -
Sto6g0459 737 PRINTS Leucine-rich repeat signature 281 294 - -
Sto6g0459 737 Pfam Protein kinase domain 452 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0459 737 Gene3D Transferase(Phosphotransferase) domain 1 527 732 - -
Sto6g0459 737 Gene3D Ribonuclease Inhibitor 40 154 IPR032675 -
Sto6g0459 737 Gene3D Ribonuclease Inhibitor 155 229 IPR032675 -
Sto6g0459 737 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Sto6g0459 737 Gene3D Phosphorylase Kinase; domain 1 455 526 - -
Sto6g0459 737 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 415 726 - -
Sto6g0459 737 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 303 398 - -
Sto6g0459 737 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 5 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0459 Sto-Chr6 5048474 5051301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0459 30 722 Receptor kinase-like Gene Family AT3G51740 56.905 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto6g0459 Pkinase 2.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0459 - - gmx:100799290 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0459 6 5048474 5051301 Sto6g0459 6 5048474 5051301 ECH