Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0452 ATGCGGCCTCTCTGCCCAAGAGGTAATTCAATCCCAATAGGAATAGGGGTACTTCTTGATTTGAATTCTTCAATTGGAACAATGGCTCAAACTTGCATAAGCCTAGGTCTCACTGATTTCTATAACCACAATAATGCTTCCTATGTTACCAAACTCTCTCTTCATATTAGAGACACTCACAATGACATTGTCACAGCAGCTTCTGCAGCTTTGGATCTTATAGACAATCAAAATGTGCATGCCATCATTGGACCCCAAAATTCAGGAGAAGCCAGATTTGTTGCTGAAATAGGGACCAAAGCTCAGATACCCATCATCTCATTTTCAGCAACAAGTCCTTCTCTTTCTCCATCCCAAACCCCTTACTTTGTCCGTACAACACAGAGTGATTTGTCTCAGGTTGAAGCCATATGTGCCATTGCTCAAGCTTATGGATGGCAAAAGATCATCCTCATCTCTGAAAACACTGAATATGGGAATGGTTTGATCCCTTATCTTGCAGCTGCTTTGGGAGAAATCAGCATACAAGTTCCTTACAGAACTGCCATTGATCCACACTCACAGGAGGCTGAAATTTCAAAGGAGGTGAAGAAGTTGAAGGGCATGCAGACGAAGGTATTTCTAGTTCATATGAGTGCTGATGTTGGTTCAAATTTTTTCAGACTTGTAAATAGTGCAGGGATGATGAGGGAAGGATATGCTTGGATGGTCACCCAAGAGATGTCTGCTAAGATGAATCCTATGGGTCCAAAAGTGATGGGCTATATGCAAGGTGTATTAGGAGTAAGGCCAATGGTGAAAAAAACTAAAGGGCTTGAGGACTTGAACAGGAGATGGAAAGCTATGGCTAATGCTTACAACAAGTCTTCTGTGTTATCCCTCTTTGGGATATGGGCTTATGATACAGTCCAAGCTTTGGCCCTTGCAGTTGAGAAAGTAGGCATAGCCAATTCTACCTTCCAAAAGTCAAATATGACCAACAAAAGCAGAGATAAGTATGTAATGGGCCCAAGACTTCTCAACACAATTCTAGATACTAAATTGAAAGGCCTTTCTGggaatttcaatttagttgaaGGGCAGTTGGAACCTTCAGTACTTGAAGTGTTCAATGTGATAGGGAGAAAAGAAAGGATCATTGGATATTGGATCCCCCAAATGGGTCTATTCAGAGATTTGGATGAAGATGGTGTCCCAATGGCTAAAGGGAAACTGAAGCAACCAATATGGCCAGGTGACACTATAGAACCACCAACGGTGTTGAGAATTGGAGTTCCAGTAAGACAAAGTTTTACTGAATTTGTGAAAGTAGAAAGGGAATCTCCAAATGGTACATCCAAAATTTCTGGTTTTTCTATTGATGTGTTCTTGGAAGCAATCAAGAAGCTTGATGTTATAATCGGAGATATCACAATCCAATGGAATCGCACAAGATGTGTGGATTTTACAACATCATATTTGGAGTCAAGCGTGTGGATGGTGGTTTCTTTCAAGAGTGGCAATACCACATGGACTTTGTTTAGACCATTCCATTGGTCACTTTGGCTATTCATTCTCGAATTGTTTCCGATTGTAActcttgtaatatatatattggaatttGAAATCGTCAAAAGCAGTGTGGACAACAACATTATACGGTTTCTCTTCACCATTTACACTCACAGTGAACGTTTGGTGAGCAATTGGTCACGATGTTTGGCCATAACAAGCTTTGGTGTGTTTGTGATCATATTGCAAGTATATACTGCCAATCTCACTTCAATATTATCAGAAGAGAGAGCGATGGTGGCTTCAGTGAGTAACGTAAAAGAGATTAAAAGCAAGGATTACAATGTGGGGTACCAAAGAGGGTCATGGGTGAAAGGGTTTCTGATTGAAGAATTAGGATTGAAGGAGTCTCAGTTAAAGGGGTATGGCACACCTGAGGAATATAGCAAAGCACTGTCACTTGGAAGCAAAAAAGGAGTGTCATACTTGTCGTCTGCAATTTTGAAAGTGAGTGAAGACATAGACGTGTTTGAAGGAATAAAGGTTGCTTTTGGCGTTATTTTATGGGGTTATATTAAATTCCGCTTCTTCCGAGGAGAGTATAGCCCTTCTTCCCAACCTCCAGGAACTACACTTGATACTACTGCAAGTGAAGACCACCACACTTGTCTGAGTCCACATCATGATGATACATTTGATGATGATATCTATCATTCTGACTACTATTGA 2220 0.4009 MRPLCPRGNSIPIGIGVLLDLNSSIGTMAQTCISLGLTDFYNHNNASYVTKLSLHIRDTHNDIVTAASAALDLIDNQNVHAIIGPQNSGEARFVAEIGTKAQIPIISFSATSPSLSPSQTPYFVRTTQSDLSQVEAICAIAQAYGWQKIILISENTEYGNGLIPYLAAALGEISIQVPYRTAIDPHSQEAEISKEVKKLKGMQTKVFLVHMSADVGSNFFRLVNSAGMMREGYAWMVTQEMSAKMNPMGPKVMGYMQGVLGVRPMVKKTKGLEDLNRRWKAMANAYNKSSVLSLFGIWAYDTVQALALAVEKVGIANSTFQKSNMTNKSRDKYVMGPRLLNTILDTKLKGLSGNFNLVEGQLEPSVLEVFNVIGRKERIIGYWIPQMGLFRDLDEDGVPMAKGKLKQPIWPGDTIEPPTVLRIGVPVRQSFTEFVKVERESPNGTSKISGFSIDVFLEAIKKLDVIIGDITIQWNRTRCVDFTTSYLESSVWMVVSFKSGNTTWTLFRPFHWSLWLFILELFPIVTLVIYILEFEIVKSSVDNNIIRFLFTIYTHSERLVSNWSRCLAITSFGVFVIILQVYTANLTSILSEERAMVASVSNVKEIKSKDYNVGYQRGSWVKGFLIEELGLKESQLKGYGTPEEYSKALSLGSKKGVSYLSSAILKVSEDIDVFEGIKVAFGVILWGYIKFRFFRGEYSPSSQPPGTTLDTTASEDHHTCLSPHHDDTFDDDIYHSDYY 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0452 739 Gene3D - 418 462 - -
Sto6g0452 739 PANTHER GLUTAMATE RECEPTOR 13 463 - -
Sto6g0452 739 PANTHER GLUTAMATE RECEPTOR 462 658 - -
Sto6g0452 739 SUPERFAMILY Periplasmic binding protein-like II 415 653 - -
Sto6g0452 739 Gene3D - 41 134 - -
Sto6g0452 739 Gene3D - 503 619 - -
Sto6g0452 739 Gene3D - 463 502 - -
Sto6g0452 739 Gene3D - 135 302 - -
Sto6g0452 739 SUPERFAMILY Periplasmic binding protein-like I 13 412 IPR028082 -
Sto6g0452 739 CDD PBP1_GABAb_receptor_plant 15 393 IPR044440 -
Sto6g0452 739 Pfam Receptor family ligand binding region 39 373 IPR001828 -
Sto6g0452 739 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 462 658 - -
Sto6g0452 739 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 13 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0452 Sto-Chr6 4982322 4985646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0452 7 689 Ion Channels AT2G29120 34.367 1.80e-139 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0452 K05387 - jre:108998809 586.26