Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0451 ATGGCTCAAAATTGCATACGCCTAGGTCTCTCTGATTTCTATAACCACAATAATGCCTCCTATGCCATTACACTCTCTCTTCATATTAGAGACACTCACAATGACATTGTCACAGCAGCTTCTGCAGCTTTGGATCTTATAGACAATCAAAATGTGCATGCCATCATTGGACCCCAAAATTCAGGAGAAGCCAGATTTGTTGCTGAAATAGGGACCAAAGCTCAGATACCCATCATCTCATTTTCAGCAACAAGTCCTTCTCTTTCTCCATCCCAAACCCCTTACTTCGTCCGTACAACACAGAGTGATTTGTCTGAGGTTGAAGCCATATGTGCCATTGCTCAAGCTTATGGATGGCACAAGATCATCCTCATCTCTGAAAACACTGAATATGGGAATGGTTTGATCCCTTATCTTGCAGCTGCTTTGGGAGAAATCAACATACAAGTTCCTTACAAAACTTCCATTGATCCACACTCACAGGAGGCTGAAATTTCAAAGGAGGTGAAGAAGTTAAAGGGCATGCAGACAAAGGTATTTCTAGTTCATATGAGTGCTGATGttggttcaaatttttttaGACTTGTAAATAGTGCAGGGATGATGAGGGAAGGATATGCTTGGATGGTCACCCAAGAGATGTCTGCTAAGATGAATCCTATGGGTCCAAAAGTGATGGGTTATATGCAAGGTGTATTAGGAGTAAGGCCTATGGTGAAAAAAACTAAAGGGCTTGAGGACTTGAACAGGAGATGGAAAGCTATGGCTAATGCTTACAACAAGTCTTCTGTGTTATCCCTCTTTGGGATATGGGCTTATGATACAGTCCAAGCTTTGGCCCTTGCGGTTGATAAGGTAGGCATAGCCAATTCTACCTTCCAAAAGTCAAATATGACCAACAAAAGCAGAGATAAGTATGTAATGGGCCCAAGACTTCTCAACACAATTCTAGATACTAAATTGAAAGGCCTTTCTGggaatttcaatttagttgaaGGGCAGTTGGAACCTTCAGTACTTGAAGTGTTCAATGTGATAGGGAGAAAAGAAAGGATCATTGGATATTGGAGCCCCCAAATGGGTCTATTCCGAGATTTGGATGAAGATGGTGTCCCAATGGCTAAAGGGAAACTGAAGCAACCAATATGGCCAGGTGACACTATAGAGCCACCAACAGTGTTGAGAATTGGAGTTCCAGTAAGACAAAGTTTTACTGAATTTGTGAAAGTAGAAAGGGGATCTCCAAATGGTACATCCAAAATTTCTGGTTTTTCTATTGATGTGTTCTTGGAAGCAATCAAGGTTTTACCTTTTTCCTTTCGTTATGAGTTTGTCCCCTTGACAAACAAAAATGGAACAACTGGTGGTAACTATGATGAGCTTCTTTGCCAAATTAAAGAGAAGGCAAGTTTGTGA 1416 0.4032 MAQNCIRLGLSDFYNHNNASYAITLSLHIRDTHNDIVTAASAALDLIDNQNVHAIIGPQNSGEARFVAEIGTKAQIPIISFSATSPSLSPSQTPYFVRTTQSDLSEVEAICAIAQAYGWHKIILISENTEYGNGLIPYLAAALGEINIQVPYKTSIDPHSQEAEISKEVKKLKGMQTKVFLVHMSADVGSNFFRLVNSAGMMREGYAWMVTQEMSAKMNPMGPKVMGYMQGVLGVRPMVKKTKGLEDLNRRWKAMANAYNKSSVLSLFGIWAYDTVQALALAVDKVGIANSTFQKSNMTNKSRDKYVMGPRLLNTILDTKLKGLSGNFNLVEGQLEPSVLEVFNVIGRKERIIGYWSPQMGLFRDLDEDGVPMAKGKLKQPIWPGDTIEPPTVLRIGVPVRQSFTEFVKVERGSPNGTSKISGFSIDVFLEAIKVLPFSFRYEFVPLTNKNGTTGGNYDELLCQIKEKASL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0451 471 CDD PBP1_GABAb_receptor_plant 1 366 IPR044440 -
Sto6g0451 471 PANTHER OS06G0188250 PROTEIN 1 466 - -
Sto6g0451 471 Gene3D - 391 469 - -
Sto6g0451 471 SUPERFAMILY Periplasmic binding protein-like I 15 385 IPR028082 -
Sto6g0451 471 Gene3D - 12 108 - -
Sto6g0451 471 Pfam Receptor family ligand binding region 3 346 IPR001828 -
Sto6g0451 471 Gene3D - 109 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0451 Sto-Chr6 4975854 4977368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0451 5 465 Ion Channels AT2G24710 37.214 4.94e-113 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0451 K05387 - jre:109004625 478.789