Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0443 ATGAGGTCCTCTTCTTTCACTCAGCTCCTTTCCATGGACAATCAATGGGTTACTTCGGAAATGAATTCTGATGGTGTTGCGAGTGAAATCCCTAAATTCAAGTCTACCCCACCTCCCTCTTTGCCCCTTTCTCCTTCCcctctttctccttcttcctatTTGGCTTTCCCTTCTGCCTTTAGCCCTTCCCAGTTCTTGAACTCGCCTCTGTTCCTTTCCTCTCCAAATGTTCTTCCATCTGCTGAGAACTTCAATGACAAGAAGGAGGAGCAGCAGGAGAAAAGCTTCTCTGACTTCTCTTTCCAAACTCCAAGCATGTTTCAATCGGAACCACTGAAACCAGAAGCATGGAGTGAGAAGACAGCAGCAAAATCTGAATACCCATTAACTCAGAGCTTCTCCTCAGAAATGGCTCCAACCAGACCACCACAAACACAAACTAATTTGGCTCCTGCTTCAGGTTATAATACTAACTACACTAATTTAACTCAGTCTGCTAGAGAGCAAAAGAAGTCAGAAGATGGGTACAACTGGAGGAAATATGGACAGAAACAAGTGAAAGCCAGCGAGAATCCGCGCAGTTATTACAAGTGCACGCATCCGACTTGCTCGATGAAGAAGAAAGTTGAGAGGTCCTTGGATGGACAAGTTACTGAGATAGTATACAAGGGAAGCCATAACCATCCCAAGCCTCAGTCTACTAGAAGATCAAGTTCTCACTCAATTCAACCTTCTAACTCCTGCACCAACTCTGGGATTTCTGATCAATCAGTAGTGACCCTAGGGAATCCCCAAATGGAGCCGGTCTCGATGCAAGAAGATTCTTCGGTCTCCATCGGAGAAGAGGACTTTGAGCAAACATCACAAACCTGTTACTCTGGGGAAAATGACAATGACTTTGGCCCTGATGCCAAAAGATGGAAAGGAGAGAATGAAATGGAAGGCTATTCCAACTTTGGGAGTAGAACTGTGAGGGAACCAAGAGTTGTAGTTCAAACTACAAGTGAAATTGATATACTTGATGATGGCTATAGGTGGAGGAAATATGGACAGAAAGTAGTTAAGGGAAATCCAAACCCAAGGAGCTACTACAAATGCACAGCTTCAGGATGCACGGTGAGAAAGCATATCGAGCGAGCGGCGCATGATATGAAAGCTGTGATCACAACTTATGAAGGGAAACACAACCATGATGTTCCGGCAGCGCGAGGCAGCGGGAGTTATAATGCAGCCGGGAATTCACTGAACAACAACAACACCAACAGCAAACCGGTGACTGCGCCTATAAGGCCATCCGCGGTGACCGGTTATTCTAATGCATCAAGTTTTGCAAATTCACTTCAGAACACAAGGGCACCACCAACCTCTGCAAGTCAAGAACCATTTCTGCTAGAAATGTTGCAGAGCCCGGCAAGTTTTGGGTACTCGGATTTCGGCAGATCATATAACAACAATGGACAAGACTCAGATGCTGCATACTCCAAGGTCAAGGATGAGAGGAAGGAGGACTCATTCCTTCAGTCATTTAAGTCTTATAACTTCTGA 1545 0.4466 MRSSSFTQLLSMDNQWVTSEMNSDGVASEIPKFKSTPPPSLPLSPSPLSPSSYLAFPSAFSPSQFLNSPLFLSSPNVLPSAENFNDKKEEQQEKSFSDFSFQTPSMFQSEPLKPEAWSEKTAAKSEYPLTQSFSSEMAPTRPPQTQTNLAPASGYNTNYTNLTQSAREQKKSEDGYNWRKYGQKQVKASENPRSYYKCTHPTCSMKKKVERSLDGQVTEIVYKGSHNHPKPQSTRRSSSHSIQPSNSCTNSGISDQSVVTLGNPQMEPVSMQEDSSVSIGEEDFEQTSQTCYSGENDNDFGPDAKRWKGENEMEGYSNFGSRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTASGCTVRKHIERAAHDMKAVITTYEGKHNHDVPAARGSGSYNAAGNSLNNNNTNSKPVTAPIRPSAVTGYSNASSFANSLQNTRAPPTSASQEPFLLEMLQSPASFGYSDFGRSYNNNGQDSDAAYSKVKDERKEDSFLQSFKSYNF 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0443 514 MobiDBLite consensus disorder prediction 227 296 - -
Sto6g0443 514 MobiDBLite consensus disorder prediction 407 431 - -
Sto6g0443 514 SUPERFAMILY WRKY DNA-binding domain 332 400 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g0443 514 MobiDBLite consensus disorder prediction 222 305 - -
Sto6g0443 514 Pfam WRKY DNA -binding domain 341 397 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g0443 514 Pfam WRKY DNA -binding domain 173 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g0443 514 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 113 258 IPR044810 GO:0003700
Sto6g0443 514 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 275 510 IPR044810 GO:0003700
Sto6g0443 514 MobiDBLite consensus disorder prediction 77 156 - -
Sto6g0443 514 ProSiteProfiles WRKY domain profile. 335 400 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g0443 514 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 275 510 - -
Sto6g0443 514 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 113 258 - -
Sto6g0443 514 MobiDBLite consensus disorder prediction 397 431 - -
Sto6g0443 514 Gene3D WRKY domain 157 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g0443 514 SMART WRKY_cls 340 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g0443 514 SMART WRKY_cls 172 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g0443 514 Gene3D WRKY domain 327 393 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g0443 514 MobiDBLite consensus disorder prediction 124 156 - -
Sto6g0443 514 SUPERFAMILY WRKY DNA-binding domain 169 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g0443 514 ProSiteProfiles WRKY domain profile. 167 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g0443 514 MobiDBLite consensus disorder prediction 478 503 - -
Sto6g0443 514 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0443 Sto-Chr6 4894542 4896854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0443 9 509 WRKY Transcription Factor Family AT2G38470 44.424 3.12e-115 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto6g0443 WRKY 4.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0443 K13424 - gmx:100776837 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0443 6 4894542 4896854 Sto6g0443 6 4894542 4896854 ECH