Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0420 atggctTCTAGGGGGCGAAAGAAAACTGCTCTTCAACACAAGTTGCATCAGCTTCGATCTGTCACTAATTCTAGTGCCGTGAATAAGGCCTCAATTATTGTGGATGCTTACAAATATATAGAGGATTTGAAGCAAAAAGTGGAGGGACTCAACGCTGAACTTGGAAGCACTACTACTACTGAATCATCATCCTCCCAGAATCATCATGAATTACCTATGGTAAGAGTGGAAACCCTAGAAAGGGGTTTCCTGATAAATGTATTCTCGGAAAGGAATTGCCCAGGAATGCTTGTGTCAATACTTGAAGCCTTTGAAGAGCTGGGACTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGATGCCTTTCAGCTACAAGCTGTTGGAGGAGAAAGTGAAGAGAGTATAGATGCACAAGTGGTGAAGCAAGCAGTGCTGCAAGCAATCAAGAACATGGATGATCagtaa 465 0.4194 MASRGRKKTALQHKLHQLRSVTNSSAVNKASIIVDAYKYIEDLKQKVEGLNAELGSTTTTESSSSQNHHELPMVRVETLERGFLINVFSERNCPGMLVSILEAFEELGLDVLDARVSCEDAFQLQAVGGESEESIDAQVVKQAVLQAIKNMDDQ 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0420 154 CDD ACT_UUR-ACR-like 94 148 - -
Sto6g0420 154 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 153 - -
Sto6g0420 154 Coils Coil 33 60 - -
Sto6g0420 154 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0420 Sto-Chr6 4647875 4649124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0420 1 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 32.500 4.75e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0420 - - aip:107628501 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0420 6 4647875 4649124 Sto9g2598 9 28401054 28404057 ECH
Sto6g0420 6 4647875 4649124 Sto5g1461 5 10014578 10015157 ECH
Sto6g0420 6 4647875 4649124 Sto6g0420 6 4647875 4649124 ECH
Sto6g0420 6 4647875 4649124 Sto9g2258 9 26035824 26037506 ECH
Sto6g0420 6 4647875 4649124 Sto5g4379 5 52412886 52413702 ECH