Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0403 ATGGGGAATTATAGGTTCAAGTTATCGGATATGATGCCAAATGCTTGGTTCTACAAGCTGAGGGATAtgggaaagaggaagaagaagcacCAAAgcaccaagaagaagaagaagaaacaatgctcgtcatcttcttcttctcctcctcctccttcttcttcctattGCTCCACAACAACCTCAAAGACATCGAAACCAAAGCAACCCCACCAATGCAATCCCAGAAAGTCTTATTACTTTACAAGAGACCTCATTATTAGCCCCACCGATAGAATCCACACTTCCCCTGTCTCCAACCCCAAATTCTCACACACCCCCAAACAAAAACCCAAGAGAAGAACTTCTCCGAAGCTCGTGTCCTCCTCTGTTTCTGCCGGGTGTAGCTGTCGGACCACGGTGGAATCTGTTTGGACCAAATCAGATTCCCCACCTGATGGTGATGATGCGAACTCATCCTCGTCCCCCTTTGATGATGATACCTCTGGCGGCGGCTCGGAATTCCCAGAGCCAGAGTTCAGAACAGACCGCGTTCTTCCCACTGAGcttaattccaatttcaatccCAACCCCAACGACGTCGTGATCGATGTGGACAAGAATTCCATCGCCAGAAAAGACGACAAGCTAGAAGACGGGCTCGATTCTTTCCCCGAGCTCGTCGAGCTGCCTCGCATCGTAACCAGGCGCCGCGCGAATCCCGAGAAGGAGCAGAAACAGGGGAATAATCTCAAAGTTAAGATTTTGAGGCAAGACACGGCGTCGTGTCGAGATCAGAGGACGACCCATGTCCGGAGATTCTCCGTTAGCTCCCCCGGCGTGAGGATTCGGGTCAATTCGCCGAGATTCGCCGGCCGGAGAATGCAGGGGAGTGGCGGCCGGAAGAGCGTGTCGTCTTCGTCGGCGACGGCGGGAGGGTGCCGGAGGAGCCTCTCCGACAGCTTTGCGGTGGTGAAGGCGTCGTTCAATCCGCAGAGGGATTTCAGAGAATCGATGGTGGAGATGATTGTGGAGAATAATATCAGAGCGTCGAaggatttggaagatcttcttGCTTGCTACCTTTCCCTTAATTCGGATGAATATCACGACCTCATCATCAAGGTGTTCAAGCAGATATGGAAGTCAAAAGATTTTAAGGATTAA 1143 0.4584 MGNYRFKLSDMMPNAWFYKLRDMGKRKKKHQSTKKKKKKQCSSSSSSPPPPSSSYCSTTTSKTSKPKQPHQCNPRKSYYFTRDLIISPTDRIHTSPVSNPKFSHTPKQKPKRRTSPKLVSSSVSAGCSCRTTVESVWTKSDSPPDGDDANSSSSPFDDDTSGGGSEFPEPEFRTDRVLPTELNSNFNPNPNDVVIDVDKNSIARKDDKLEDGLDSFPELVELPRIVTRRRANPEKEQKQGNNLKVKILRQDTASCRDQRTTHVRRFSVSSPGVRIRVNSPRFAGRRMQGSGGRKSVSSSSATAGGCRRSLSDSFAVVKASFNPQRDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWKSKDFKD 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0403 380 MobiDBLite consensus disorder prediction 90 171 - -
Sto6g0403 380 MobiDBLite consensus disorder prediction 291 306 - -
Sto6g0403 380 MobiDBLite consensus disorder prediction 22 76 - -
Sto6g0403 380 MobiDBLite consensus disorder prediction 282 306 - -
Sto6g0403 380 MobiDBLite consensus disorder prediction 115 160 - -
Sto6g0403 380 Pfam DNA-binding domain 1 42 IPR025830 GO:0003677
Sto6g0403 380 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 252 373 - -
Sto6g0403 380 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 228 - -
Sto6g0403 380 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 314 373 IPR006458 -
Sto6g0403 380 MobiDBLite consensus disorder prediction 42 75 - -
Sto6g0403 380 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 252 373 IPR038933 GO:0045892
Sto6g0403 380 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 228 IPR038933 GO:0045892
Sto6g0403 380 Pfam Transcriptional repressor, ovate 320 374 IPR006458 -
Sto6g0403 380 MobiDBLite consensus disorder prediction 22 41 - -
Sto6g0403 380 ProSiteProfiles OVATE domain profile. 316 375 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0403 Sto-Chr6 4464193 4465511 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sto6g0403 Ovate 1.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0403 - - qlo:115952328 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0403 6 4464193 4465511 Sto6g0403 6 4464193 4465511 ECH