Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0402 ATGAACAAGGCCAGATTAGGAGGCATGGCTCACACTGGATACGTTGAAACCGACCCGTCTGCTCGATATGGACGTGTAGGGGCAATGAAGACAGTGTATAGAGCATTTGATGAGATTCTAGGAATTGAAGTTGCTTGGAACCAAGTCAAGCTTGGAGACATCTTTCATTCCCCAGATGAACTCCAACGCCTTTATTCAGAGGTTCATCTCCTCAAGAACCTTGATCATCACTCCATAATGACTTTCTATGCTTCTTGGATTGACATCAACCGCCGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCTCCCTTAGAGAGTATAGGCAGAAGTACCAGAGAGTAGATATTCGAGCAGTCAAGAACTGGGCTCGTCAAATTCTTAGTGGTTTGGAGTATTTACACAGCCATGATCCTCCTGTGATACATAGAGATCTCAAGTGTGATAATATATTTGTCAATGGCCATCTTGGGCAGGTCAAGATTGGTACACCTGAATTTATGGCTCCAGAATTGTATGAAGAGGAATACAATGAGCTAGTGGATGTTTACTCCTTTGGGATGTGTATGATAGAGATGCTTACCTCTGAGTTTCCATACAGCGAGTGCTCCAACCCAGCTCAAATATACAAGAAAGTCACTTCGGGGAAGCTACCAAATGCTTTTTACAGAATCCAAGATTTGGAAGCTCAAAGATTTGTGGGGAAATGTTTGGCAAATGTTTCAGATAGGTTGCCAGCAAAGGAGCTCTTAATGGACCCATTTTTAGCCACAGTCCAACTTGAATCGCCATTGCCATCACCAAAAATTCAGACTCAAAAATCAAGTTCTGCTGCGCTATTTGCCAAGGTGCATCCTTGCATGGGTGACCAAACAAAGAGCACAAACATGACAATCACAGGGTCAATGAATGAAGAGGAGGACGACACAGTTTTCCTTAAAGTACAAATATCCGACAAaactgGGCATGTTAGGAATATATACTTCCCCTTTGACACAGTAAACGACACTGCCATGGATGTAGCAATGGAGATGGTAAAGGAATTGGAAATAAGCGACTTGGAGCCATTGGAGATAGCTGAAATGATAGAAGAAGAGATACTAGCTTTAATTCCAACATGGAAGGATTGGGGGTCATCTCACCAGTGTCCAAGACAGCACAGCTTCAGATACGAAGAAGAGGAAGATATGAACAACCATCATCCATTCTTCTCATCATCTTCCCGTTCTTCCTCCCACGGTTCTCTCCCATTCATGCTTGGCTCCTCCTACAAGACCCTCTTTGGTGGGACTAATAATAATACCAACCATGTCTCTTTTGCTCAGGAATGGCTTCAAGATGATGTATTTGTGGACGATGCAAGCTCAGAAAGCTCAATGAACTCCTTCAAGTATCCTAATTATATGAATCAGTATGAAGAAGATGAGGATGATGGGAATTACAAGATGTCAAGATTCTGTCCTCATGGAAAAGAGAAGATGAATAATGAGGGGTGGGGGAGGCTAAGGAGGATGCGTTCATATGTGGATGTGAGGAGCCAGCAGGTGCAGCGATCGTTGATGGAGGACATATTTGTTGGTGATGTGGGTATCTCAATCTTCCCCATCATTGTGAACAACATTACATGCAAGGGACTGCGCTCGGCGGCGAATGAGCCGTTGACGAATTTCCTGGAAAACACGGTGCCGTACATTCCGGAACTGTCGTTGCCTGAAGCATACATGCCGGCGATGATGATCCCGTCGGCGGGGCCGGCGGTGGTGGATTACCGGATGCTGAAGAACGGATGCACGGACGGGATGGTGAGATCGGCGAAGGAGTTCGGCGCGTTTCGGATCTGCGGTCACGGGATCTCCGGGCAGGAATTGGGGATAGTGGTGGAGCACGGGCAACGCATGTTCCAAATGCATGACCCACTCAGGGATATTATCCCCTGCGTTCGCTCTCGCAAGGGTACACTGGAATTCACTGCCCCCAAATTCTTTCATCATCACACACATCGAAACttctgGATACATATGGGGAATGTGGGAAGTAGACTTGATGGGATAGTGGAGCAAGTATTGATGGGTCTGTGTGAAGGATTGAAGGAGAGAATAATAGAAGAGACGGAGTGTGAGATTTGCTTGTGCAGGTATCCACACGACAATGCGTCCAGGCAAGGGAAGCAAGGTTCAGCATCATGGGAAGAGAAAAACGACAGAATGTTGTGGGATCATGTGTTGCGTTTTTACCTTCCCATGGAGCAATGCATATTCTATGTGCAATCCGAAAGAGGCCCTCTTTCCTTTGATGCAGCTCCACACACTATAGTTGTCACCATTGGCAGACAACTTGAGGAGTGGAGCAAGGGTGAATTCAAATGTGTTAGTGGGGAAATGATCTTCATGCCAAGTTTTGAGAGTAGGCAAGCCTCTTTTTCTATAGAGCTCAAATGCTGCTCTTCAAATCTAAATTCCACTGCTTCAAACAAATTTAGCAACATAATCACCTTATCTGATCAACTCTTAATTGTGCTTTGCCTTTCTTTCTTGTACAAATTCTTATTATACTTCTTCTTTTCATCATCCTAA 2577 0.4474 MNKARLGGMAHTGYVETDPSARYGRVGAMKTVYRAFDEILGIEVAWNQVKLGDIFHSPDELQRLYSEVHLLKNLDHHSIMTFYASWIDINRRTFNFITELFTSGSLREYRQKYQRVDIRAVKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFVNGHLGQVKIGTPEFMAPELYEEEYNELVDVYSFGMCMIEMLTSEFPYSECSNPAQIYKKVTSGKLPNAFYRIQDLEAQRFVGKCLANVSDRLPAKELLMDPFLATVQLESPLPSPKIQTQKSSSAALFAKVHPCMGDQTKSTNMTITGSMNEEEDDTVFLKVQISDKTGHVRNIYFPFDTVNDTAMDVAMEMVKELEISDLEPLEIAEMIEEEILALIPTWKDWGSSHQCPRQHSFRYEEEEDMNNHHPFFSSSSRSSSHGSLPFMLGSSYKTLFGGTNNNTNHVSFAQEWLQDDVFVDDASSESSMNSFKYPNYMNQYEEDEDDGNYKMSRFCPHGKEKMNNEGWGRLRRMRSYVDVRSQQVQRSLMEDIFVGDVGISIFPIIVNNITCKGLRSAANEPLTNFLENTVPYIPELSLPEAYMPAMMIPSAGPAVVDYRMLKNGCTDGMVRSAKEFGAFRICGHGISGQELGIVVEHGQRMFQMHDPLRDIIPCVRSRKGTLEFTAPKFFHHHTHRNFWIHMGNVGSRLDGIVEQVLMGLCEGLKERIIEETECEICLCRYPHDNASRQGKQGSASWEEKNDRMLWDHVLRFYLPMEQCIFYVQSERGPLSFDAAPHTIVVTIGRQLEEWSKGEFKCVSGEMIFMPSFESRQASFSIELKCCSSNLNSTASNKFSNIITLSDQLLIVLCLSFLYKFLLYFFFSSS 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0402 858 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 525 - -
Sto6g0402 858 Pfam Protein kinase domain 27 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0402 858 ProSiteProfiles Protein kinase domain profile. 18 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0402 858 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED 9 525 - -
Sto6g0402 858 Gene3D Transferase(Phosphotransferase) domain 1 101 262 - -
Sto6g0402 858 Gene3D Phosphorylase Kinase; domain 1 10 99 - -
Sto6g0402 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Sto6g0402 858 SUPERFAMILY Clavaminate synthase-like 577 791 - -
Sto6g0402 858 SMART serkin_6 26 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0402 858 SUPERFAMILY Protein kinase-like (PK-like) 27 258 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0402 Sto-Chr6 4440764 4448928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0402 13 525 MAP Kinase Kinase Kinase AT3G51630 52.984 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sto6g0402 Pkinase 1.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0402 K08867 - gmx:100170673 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0402 6 4440764 4448928 Sto6g0402 6 4440764 4448928 ECH