Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0387 ATGCACGTAAAACGTGTCAACCATAAAGAGCATGTTGCTACAGTACTTCCTGAACCTCAAACTCATGCTCGTTCACTGCAGTCTGCACCTCCCAGTTTTAAGACGAGAGTGAAACCCATTCAACCTGTTAATAAAGTCACAAACATTAGAACACGAGCATTATCTGCTCCATCAACTCTTGATGGAGCAGAACAAGAAAATTTGGTGTCAGTTGAGTATGAGGAACAAGAAGAGTCAAAACACCAAGCTGGATTAATAAAGGAGCAACATTCATCCAGTCCACAACCTTTACCTCTCCCATCTCCTCAGGTTGGTGGTGTATTGAAGACTACTGGTAGCTTCAAGTCAGTGACAGCTAGTGGTCCTCTATATGCATCTGGACCTTTGCCGCTGCCACCTACTGGGACACTTAAGAACTTCCAGTATGAGGAAATTGCTGCTGCTTGCCACAATTTCTCTTCAGATCGATACATGTCGGAAAGTCTTTCTTCGACCATATATAAAGCTTCCTTTGGTGATGATGCTTCAAGTTCAAAGAATTTTGAAGCCACTGTGACTCGTCTTCACCCATCAAGTCAGgcCTTGAAAGAATTCATAAATGAGGTTAACACTCTTGCATCTTTGCAACATCCAAACCTCTGCAAATTGCTAGGTTATCATGCTCGGGAGGGCTCGGAACAGAGAATGTTGGTTTATGAGAGGCTATATCATGGAAGCTTGGACCGCCTATTGTATGGGAGATCTGATGGTCCACCTCTGGATTGGAATACAAGAATGAAAATTGCTTTGTGTGCTGCGCAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCAATGTACAATGAGTTTTCAACAGTCAACATACAGATTGACAAAGATTTCAGTGCGAAGCTTTCGGGTTATGGTTGTGTTGGACATATTCCTGAAGACGAGATTCCAAGCAGTTCATCTGCTGTGGGAAACCTATCAGTGGAGACACTGGAAAGAAGATTGCTCACTCCAAAGAGCAACGTGTGGAGTTTTGGGATTTTTCTTCTGGAGCTACTTACTGGAAGAAAGAATCTGGACAGCCGTCACCCGAAGGAAGAGAGGAATTTAGTGAAGTGGAGCCGGCCGTTCCTAGCTGACGATTGTCGACTGTCATTGATCATGGATCCTCATCTGAAAGGTCGCTTTCCTTCCAAAGCCGCAAGAACAGTGGCTGATATTGCACTAAGATGCCTTCAGAAGGAGCCATCAGAAAGACCCACCATGAGAACTGTTGTTGAGCATCTCAAAGTCATACAGGATATGAAGTACTCTTGTCGGTTTCCTCTGCAAGAGCCGGCCACAATTTCTGGAAAATACATGTCAAGATCACCTAGTCTCAATGGCATTGTCTGTCCCCACCCTAGATCGAGTTTCTCTCCATCTCCACCACCAACTCAACCATCTGCTTCACCTCCGAGATGGTCCGGTTCGGGTGTGCCCGTCCTGCTTCCTTCGCATGCTTGTTCCTCCATTCTCTCATTGCAGGAGCTTGATAGGCAGTTAAGCCACAAGTCTTCTTCCTCAGCGTCTAGGAGGGCTAGTGTTGAAGGATATTGA 1593 0.4526 MHVKRVNHKEHVATVLPEPQTHARSLQSAPPSFKTRVKPIQPVNKVTNIRTRALSAPSTLDGAEQENLVSVEYEEQEESKHQAGLIKEQHSSSPQPLPLPSPQVGGVLKTTGSFKSVTASGPLYASGPLPLPPTGTLKNFQYEEIAAACHNFSSDRYMSESLSSTIYKASFGDDASSSKNFEATVTRLHPSSQALKEFINEVNTLASLQHPNLCKLLGYHAREGSEQRMLVYERLYHGSLDRLLYGRSDGPPLDWNTRMKIALCAAQGLTFLHEEGPFQAMYNEFSTVNIQIDKDFSAKLSGYGCVGHIPEDEIPSSSSAVGNLSVETLERRLLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPHLKGRFPSKAARTVADIALRCLQKEPSERPTMRTVVEHLKVIQDMKYSCRFPLQEPATISGKYMSRSPSLNGIVCPHPRSSFSPSPPPTQPSASPPRWSGSGVPVLLPSHACSSILSLQELDRQLSHKSSSSASRRASVEGY 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0387 530 Pfam Protein tyrosine and serine/threonine kinase 166 427 IPR001245 GO:0004672|GO:0006468
Sto6g0387 530 PANTHER OS01G0822200 PROTEIN 33 529 - -
Sto6g0387 530 MobiDBLite consensus disorder prediction 511 530 - -
Sto6g0387 530 Gene3D Transferase(Phosphotransferase) domain 1 235 439 - -
Sto6g0387 530 Gene3D Phosphorylase Kinase; domain 1 133 233 - -
Sto6g0387 530 SUPERFAMILY Protein kinase-like (PK-like) 131 439 IPR011009 -
Sto6g0387 530 MobiDBLite consensus disorder prediction 462 489 - -
Sto6g0387 530 ProSiteProfiles Protein kinase domain profile. 152 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0387 530 PANTHER OS01G0588500 PROTEIN-RELATED 33 529 - -
Sto6g0387 530 MobiDBLite consensus disorder prediction 468 482 - -
Sto6g0387 530 MobiDBLite consensus disorder prediction 73 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0387 Sto-Chr6 4304950 4307190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0387 131 431 Receptor kinase-like Gene Family AT4G02010 37.134 2.00e-55 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Sto6g0387 PK_Tyr_Ser-Thr 9.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0387 - - gmx:100809117 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0387 6 4304950 4307190 Sto6g0387 6 4304950 4307190 ECH