Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0386 atGAGGGGAGGGGTCTGCATGCACACGCCTCCTTTAATTTCTCTTCCATCTCTTCTTTCATTGGTCCCTTCATGCTTTTCCGGTCACCGTAGATTCACATTACTTCCTCATTCCCTTCCTTCCTTCTCCGATCTGATTATACCTTATTGCTCCTTTCCCGAATGTCACGCCTCAAGGTCGGCGCGTGCGGCGGCGGCGCCTCTTTTTTCAAATTACTCCCCGATAAACGCCTTATTCCGCGCTTCAACTGCTGCTAAAGCTAGCTTAAGGACTTGCATGAACGTCGCATGCGCCGCCTCGACGTCGATTCTGTGGCGCAAAGGTTGGGCCCTCCGATCCGGCGAATTCGCCGATCTCTGTGATAAGTGCGGTTCTGCTTATGAGCAATCAACGTTTTGCTATGTCTTCCACTCAAAGGATTCTGGTTGGAGGGAGTGCACTTCATGTGGCAAGCGTCTTCATTGTGGATGTATTGCTTCTCGGCATTTGCTTGAATTGCTAGATATAGGTGGTGTAAGCTGTATAAACTGCACAAGGGATTCTGGACTTCATCCTATTTCAACTATTGATAAGGCTAATGGATCTGGTAAATCGAAAGTTGAAAATGACAGTGAAGTGCAATGCTCCTTTGTGGCTAACCAACTAAAAGGAAGCACTGTTGAAAAAGTTAGTGGTATTCAAGTAGGGGATTATGCAGAGAATAATGGGCTTAGGTGTTGGCTCCAAACTCGTAATGGTGCTACAAATGGGCCTTCTATGCAATTGAAACAAGAAGTTTTGCCTTCCATTGGAGAATTTGGAAGCACTTCAACATCACAATTTCATTCAGAGTCCAATGGATTATCTAAGGCTGCCAAATTAGACAGCTGCAAGACAGACAAGGAAATAAGAGATATGTATGAATCATTGGCTCAAACAAATTTGAGCATGACTCTTGGTGTTCCTTTAGGAAATTCAAATCCCTTTCGTAATGATGTTTTTGATGAAAGAGAACATAGTAAGACATCATCTTCGGTATTACATGGGCCCAGATCTCGCCATCTCTTACCCAAGCCCCCTAGGTCTGCCCTTACCAATGGCTTGGAGGCAAATGCAGGCATGGTGTCTCAAATTCGTGTTGCCAGGCCACCAGCTGAAGGACGGGGAAGGAATCAGTTACTTCCCCGTTATTGGCCAAGGATTACAGATCAAGAGTTACAGCAAATATCTGGAGATTCAAATTCTATCATTGTGCCACTGTTTGAGAAGATGCTTAGTGCAAGTGATGCTGGACGAATTGGTCGCTTGGTTCTTCCAAAAGCATGTGCTGAGGCATATTTTCCTCCTATCTCTCAACCAGAGGGCCTTCCTCTGAGAATCCAAGATGTGAAAGGGAAAGAATGGGTATTTCAGTTTAGATTCTGGCCAAACAATAATAGCAGAATGTATGTTTTAGAAGGTGTAACTCCCTGCATTCAGTCTATGCAGTTGCAAGCTGGAGATACTGTAACCTTTAGCCGTATGGATCCTGAGGGAAAACTTATAATGGGGTTTCGGAAGGCTACAAATTCTTCTGGAGTACAGGAATCTCATCCATCTAGTATTCCCAATGGCTCTCGTTCAAGTGAAACTTCCTATTCTGGTGTTTATGAGAATCTACCTGTATTAAGTGGCTACTCTGGCCTTCTTCAGTCATTGAAGGGAAGTTCAGAAACCCACCTAAATGCGCTGTCTAAAAAGTGGAATTCAGCTAGTGGTGACATGAATTGGCACAACAATGAGATGCATGAAAGCAGGAAAAGAGAAGGATTGCTTCTGCCACCAGTACTGGTTCCTGAGAAGAAAAGGACTCGAAATATTGGACCAAAAAGTAAAAGGTTGCTTATTGATAGCCAGGACGCACTAGAGCTGAAACTTACGTGGGAAGAGGCTCAGGATTTGCTCCGTCCATCTCCAGCAGCTAAGCCAAGCATCGTCATGATTGAAGATCATGTATTTGAAGAATATGAAGAACCTCCTGTATTTGGGAAGAGAAGTATATTTGTAGTCCGCTCAACTGGGATACATGAACAATGGACACAGTGTGATAGTTGCTCAAAATGGCGAAAGTTGCCTGTGGATGTACTTATTCCTCCTAAGTGGACATGTGCGGACAATTCATGGGATCAGAGCAGGTGTTCATGTTCTGCTCCGGATGAACTGGCCCCAAGGGAACTGGATAATCTTCTGAGATTGAATAACGAATTCAAAAAACAAAGAATGGTAGCAAGCCATAGGCCGACCCTGGAGCAGCATGAATCTTCTGGACTGGATGCGTTGGCTAATGCTGCAATACTTGGAGAAGATGCAGGTGAATCTGGTAGGACACCAGTTGCTACCACTACAAAACACCCTCGACATAGACCTGGTTGCTCCTGCATTGTCTGTATCCAGCCACCCAGTGGGAAGGGAAAACATAAACCTACATGCACTTGCAACGTGTGCATGACAGTTAAACGCCGGTTTAAAACCCTGATGATGCGAAAGAAAAAGCGTCAATCTGAACGTGAAGCAGAGCTTGCTCAGAGAAATCAGCAATCATGTGGACCTAGGGATGAATCAGAAGTAGAGAGCACCTCTAGAAATTTAACTCCAGTTGATGGTTCAGAGAATGAAGCTAGGGTTGCAAATGAGTTGGAGTCAAGAAGCCAAACAGATATGGCTGCTGAAACTTCCAAGGGACAGTTAGACTTGAACTGCCATCCTGATCGCGAAGACACTCAAGCTGGGTCAAACAATGTAAGCATGATGAGTCTACTTCAAGAAGCAACTCTTCCTCTGGAGACATATCTGAAGCAAAATGGTCTTACTagcttggtatcagagcaacaAGCAAACTCTGCTTCCAATGTTCAGTTACAGACAACGAACGAAAGCGAGGGAAGACAAAATGAGGATTGCTGTGCTGCTTCTGCTGTTCAGGAGCAGGAAAGCAGTCCTGAAGAGAACAGTGGGCAAGATAAAAGCGAAAACAATCCCCCTTCATGA 3006 0.4441 MRGGVCMHTPPLISLPSLLSLVPSCFSGHRRFTLLPHSLPSFSDLIIPYCSFPECHASRSARAAAAPLFSNYSPINALFRASTAAKASLRTCMNVACAASTSILWRKGWALRSGEFADLCDKCGSAYEQSTFCYVFHSKDSGWRECTSCGKRLHCGCIASRHLLELLDIGGVSCINCTRDSGLHPISTIDKANGSGKSKVENDSEVQCSFVANQLKGSTVEKVSGIQVGDYAENNGLRCWLQTRNGATNGPSMQLKQEVLPSIGEFGSTSTSQFHSESNGLSKAAKLDSCKTDKEIRDMYESLAQTNLSMTLGVPLGNSNPFRNDVFDEREHSKTSSSVLHGPRSRHLLPKPPRSALTNGLEANAGMVSQIRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSIIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKATNSSGVQESHPSSIPNGSRSSETSYSGVYENLPVLSGYSGLLQSLKGSSETHLNALSKKWNSASGDMNWHNNEMHESRKREGLLLPPVLVPEKKRTRNIGPKSKRLLIDSQDALELKLTWEEAQDLLRPSPAAKPSIVMIEDHVFEEYEEPPVFGKRSIFVVRSTGIHEQWTQCDSCSKWRKLPVDVLIPPKWTCADNSWDQSRCSCSAPDELAPRELDNLLRLNNEFKKQRMVASHRPTLEQHESSGLDALANAAILGEDAGESGRTPVATTTKHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAELAQRNQQSCGPRDESEVESTSRNLTPVDGSENEARVANELESRSQTDMAAETSKGQLDLNCHPDREDTQAGSNNVSMMSLLQEATLPLETYLKQNGLTSLVSEQQANSASNVQLQTTNESEGRQNEDCCAASAVQEQESSPEENSGQDKSENNPPS 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0386 1001 MobiDBLite consensus disorder prediction 846 873 - -
Sto6g0386 1001 MobiDBLite consensus disorder prediction 832 917 - -
Sto6g0386 1001 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 90 953 - -
Sto6g0386 1001 SMART B3_2 414 514 IPR003340 GO:0003677
Sto6g0386 1001 ProSiteProfiles Zinc finger CW-type profile. 679 729 IPR011124 GO:0008270
Sto6g0386 1001 MobiDBLite consensus disorder prediction 949 1001 - -
Sto6g0386 1001 Pfam B3 DNA binding domain 414 513 IPR003340 GO:0003677
Sto6g0386 1001 Gene3D - 392 519 IPR015300 -
Sto6g0386 1001 MobiDBLite consensus disorder prediction 514 536 - -
Sto6g0386 1001 SUPERFAMILY DNA-binding pseudobarrel domain 412 513 IPR015300 -
Sto6g0386 1001 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 90 953 - -
Sto6g0386 1001 CDD B3_DNA 412 513 IPR003340 GO:0003677
Sto6g0386 1001 MobiDBLite consensus disorder prediction 330 353 - -
Sto6g0386 1001 ProSiteProfiles B3 DNA-binding domain profile. 414 515 IPR003340 GO:0003677
Sto6g0386 1001 Pfam CW-type Zinc Finger 684 726 IPR011124 GO:0008270
Sto6g0386 1001 Gene3D - 682 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0386 Sto-Chr6 4296964 4304011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0386 88 952 B3 DNA Binding Superfamily AT4G32010 51.724 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sto6g0386 B3 2.6e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0386 - - gmx:100778833 1481.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0386 6 4296964 4304011 Sto6g0386 6 4296964 4304011 ECH