Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0383 ATGAAAATGCACTTCACCCCCCATTTCTTATTTCTTCTTTTCGCTCCAATTCTACTCGTCTCCGCCGACTCCGCCTTCAACGACGACGTATTGGGGTTGATTGTGTTCAAAGCCGCTCTGCGAGACCCCAATTCCAAACTCTCCACCTGGAACGAAGACGACGACACTCCCTGCAATTGGGTCGGAGTCAAGTGCGACCCGACAACCAATCGGGTCTCCGCTTTAGTCCTCGACGGCTTTTCCCTCTCCGGCCATATTGATCGAGGGCTCCTGAGATTGCAATGCCTCCAAGTTCTTTCGCTTTCCCGAAACAACTTCAGTGGGACCATAAACCCTCATCTTCCTCGCCTCGGGAGTTTGCAAATCGTTGATTTGAGCGAGAACAATCTCTCCGGGTCGATCCCACAGGAGTTTTTCCAGCAATGTGGGTCCTTGAGAGCAGTTTCATTTGCTAAGAACAAGCTTACTGGTAAGGTTCCTGATTCCTTAACCTCTTGCTCTTCGTTGGCTACTCTGAACTTTTCCTCTAATCAGTTATACGGAGAATTGCCATCTGGGATATGGTATTTGAGGGGATTACAGTCTCTTGATCTCTCAAATAACTTGTTGGAGGGAGAGGTTCCTGAGGGAATTCAGGACTTGTATGATTTGAAGGAGTTGAATCTGCAGAAGAATCGCTTCAGTGGAAGGCTTCCTGGAGATATTGGAGGCTGCTTGCTTCTGAAATCACTTGATTTTAGTGATAATTTTCTCTCTGGGAGACTTCCTGAGTCAATGAAGAGACTCAGCTCATGCATTTCCCTCAGTTTGAAGGGAAATTCATTCACAGGAGGCATTCCTGATTGGATTGGAGAATTGAAAAATCTAGAGATGTTGGACCTCTCTGCTAATAGATTCTCAGGATGGATTCCTAGGTCAATAGGAAATCTTGATTCACTGAGTAGTTTAAACCTATCAAGGAATCAATTTACAGGAAACTTACCAGAATCAATGAGTAATTGTATTAAGCTGTTGTCTCTGGACATAAGCCACAACCACTTATCAGGTCATCTTCCTTCATGGATTTTTAAGATGGGTTTACAAAATATCTATCTTACAGAAAGTAGCTTCACTCGGCGCGGTAATCCTTCATCGCTTACATCCATGCCTGCATCTTATCATGGCCTCCAGGTTTTGGATTTGTCATCAAATTCGTTTTCTGGTAATCTTCCATCTACTGTTGGGGGTCTTAGTAGCTTGCAAGTTTTCAATATGTCCACCAATAATATCAGTGGTGCTATTCCAGTGAGTATAGGAGAACTTAAATCTTTGTACATTCTTGACTTAAGTCACAACAAGCTAAATGGAAGCATTCCTTCTGATTTAGAAGGTTTGATTTCACTTGGTGAACTGAAACTACAGAAAAATTTCCTAAGCGGGAGAATTCCTGCCCAAATTGAGAAGTGTTCATCCCTGACATCTTTGAATCTCTCTCACAACAAGCTTACTGGTTCAATCCCTTCAGCCATTGCAAACTTAACCAATCTTCAGCATATAGACTTGTCATGGAATGAACTCTCTGGAAGCTTACCAAAGGAGCTGACAAATCTTTCCCACCTTTTCTCCTTCAATGTATCCTACAATCACCTTCATGGTGAGCTACCAGTGGGTGGCTTCTTCAATAGTATCTCACCCTCATCTATCTCTGCGAATCCAATGTTATGTGGTTCTGTTGTCAATCATTCCTGCCCTTCTGTTCATCCTAAACCAATTGTCCTTAACCCCAATTCCTCTGGCTCCAATTCTGGCACTTCCTCTCAAAACCGGCGTCATAAAAAGGTCATTCTCAGTATCTCTGCCCTTATTGCCATTAGTGCGGCTGCTTTCATTACTATTGGTGTGGTGGCTGTTACTGTCTTAAATGTCCATGTTCGTTATTCAATGTCACGTTCTGCTGCTCCATTTACATTTTCTGGTGGCGAAGACTATAGTTGTTCACCCCAAAATGATCCAAAATGTGGCAAACTAGTAATGTTTTCTGGTGATGCTGAATTTGCTAATGATGCCCATAATATtctcaataaagacaatgaaaTTGGCCGTGGTGGATTTGGAGTTGTTTATCACACTGTCCTTCGAGACGGGCGTTCTGTTGCAATCAAGAAGCTTACAATCTCCAGCTTGATCAAGTCCCAAGAAGACTTTGAGGAGGAAGTGAAAAAGCTTGGGAAGATGAGGCACCAGAATCTTGTGGCACTAGAAGGTTACTACTGGACTTCATCCTTGCATCTCCTTATCTATGAATACCTATCCAAAGGAAGTTTGCATAAGCTTCTACATGATGAAAACAGCAGAGACATCCTTTCTTGGCGACGAAGGTTCAAGATTATTCTTGGCATGGCAAAGGGATTGGCTCATTTACACCAAACGAACATAATCCACTACAATCTAAAATCAACAAATGTTCTGATTGACTGCTCGGGCGAGCCGAAAATAGGAGATTTCGGTTTGGTGAAGCTATTGCCAATGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTTGGATACATGGCTCCTGAGTTTGCCTGTCGCACGGTGAAGATAACCGAGAAATGTGATGTATACGGTTTCGGTATCCTAGTTTTGGAAGTAGTGACTGGGAAAAGACCTGTGGAATATATGGAGGATGATGTGATTGTTCTGTGTGACATGGTAAGGGGTGCATTGGAGAAAGGCAAGGTGGAGCAATGTGTTGATGTGAGGCTTCTGGGTAATTTTGCTGCAGAAGAAGCAATTCCAGTGATAAAATTGGGATTAATTTGTGCATCACAAGTACCATCAAATCGTCCAGACATGGCTGAGGTAATCAATATATTAGAGTTGATCCAATGCCCTTCAGAAGGACAAGAGGAATTAGCATGA 2910 0.4271 MKMHFTPHFLFLLFAPILLVSADSAFNDDVLGLIVFKAALRDPNSKLSTWNEDDDTPCNWVGVKCDPTTNRVSALVLDGFSLSGHIDRGLLRLQCLQVLSLSRNNFSGTINPHLPRLGSLQIVDLSENNLSGSIPQEFFQQCGSLRAVSFAKNKLTGKVPDSLTSCSSLATLNFSSNQLYGELPSGIWYLRGLQSLDLSNNLLEGEVPEGIQDLYDLKELNLQKNRFSGRLPGDIGGCLLLKSLDFSDNFLSGRLPESMKRLSSCISLSLKGNSFTGGIPDWIGELKNLEMLDLSANRFSGWIPRSIGNLDSLSSLNLSRNQFTGNLPESMSNCIKLLSLDISHNHLSGHLPSWIFKMGLQNIYLTESSFTRRGNPSSLTSMPASYHGLQVLDLSSNSFSGNLPSTVGGLSSLQVFNMSTNNISGAIPVSIGELKSLYILDLSHNKLNGSIPSDLEGLISLGELKLQKNFLSGRIPAQIEKCSSLTSLNLSHNKLTGSIPSAIANLTNLQHIDLSWNELSGSLPKELTNLSHLFSFNVSYNHLHGELPVGGFFNSISPSSISANPMLCGSVVNHSCPSVHPKPIVLNPNSSGSNSGTSSQNRRHKKVILSISALIAISAAAFITIGVVAVTVLNVHVRYSMSRSAAPFTFSGGEDYSCSPQNDPKCGKLVMFSGDAEFANDAHNILNKDNEIGRGGFGVVYHTVLRDGRSVAIKKLTISSLIKSQEDFEEEVKKLGKMRHQNLVALEGYYWTSSLHLLIYEYLSKGSLHKLLHDENSRDILSWRRRFKIILGMAKGLAHLHQTNIIHYNLKSTNVLIDCSGEPKIGDFGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKRPVEYMEDDVIVLCDMVRGALEKGKVEQCVDVRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVINILELIQCPSEGQEELA 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0383 969 SMART LRR_typ_2 214 238 IPR003591 -
Sto6g0383 969 SMART LRR_typ_2 310 334 IPR003591 -
Sto6g0383 969 SMART LRR_typ_2 530 554 IPR003591 -
Sto6g0383 969 SMART LRR_typ_2 506 529 IPR003591 -
Sto6g0383 969 SMART LRR_typ_2 117 141 IPR003591 -
Sto6g0383 969 SMART LRR_typ_2 190 213 IPR003591 -
Sto6g0383 969 SMART LRR_typ_2 482 505 IPR003591 -
Sto6g0383 969 SMART LRR_typ_2 286 309 IPR003591 -
Sto6g0383 969 SMART LRR_typ_2 335 358 IPR003591 -
Sto6g0383 969 SMART LRR_typ_2 434 458 IPR003591 -
Sto6g0383 969 SMART LRR_sd22_2 190 213 - -
Sto6g0383 969 SMART LRR_sd22_2 434 457 - -
Sto6g0383 969 SMART LRR_sd22_2 506 532 - -
Sto6g0383 969 SMART LRR_sd22_2 286 312 - -
Sto6g0383 969 Gene3D Ribonuclease Inhibitor 184 283 IPR032675 -
Sto6g0383 969 SMART serkin_6 686 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0383 969 Pfam Leucine rich repeat 388 447 IPR001611 GO:0005515
Sto6g0383 969 Pfam Leucine rich repeat 241 299 IPR001611 GO:0005515
Sto6g0383 969 Pfam Leucine rich repeat 484 543 IPR001611 GO:0005515
Sto6g0383 969 Pfam Leucine rich repeat 119 179 IPR001611 GO:0005515
Sto6g0383 969 CDD STKc_IRAK 692 958 - -
Sto6g0383 969 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 960 - -
Sto6g0383 969 SUPERFAMILY L domain-like 26 257 - -
Sto6g0383 969 ProSitePatterns Protein kinases ATP-binding region signature. 692 715 IPR017441 GO:0005524
Sto6g0383 969 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 960 - -
Sto6g0383 969 ProSiteProfiles Leucine-rich repeat profile. 484 507 IPR001611 GO:0005515
Sto6g0383 969 PRINTS Leucine-rich repeat signature 193 206 - -
Sto6g0383 969 PRINTS Leucine-rich repeat signature 434 447 - -
Sto6g0383 969 Gene3D Phosphorylase Kinase; domain 1 661 762 - -
Sto6g0383 969 Gene3D Ribonuclease Inhibitor 290 579 IPR032675 -
Sto6g0383 969 SUPERFAMILY Protein kinase-like (PK-like) 686 959 IPR011009 -
Sto6g0383 969 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Sto6g0383 969 Gene3D Ribonuclease Inhibitor 29 183 IPR032675 -
Sto6g0383 969 ProSiteProfiles Protein kinase domain profile. 686 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0383 969 Pfam Protein kinase domain 687 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0383 969 SUPERFAMILY RNI-like 207 549 - -
Sto6g0383 969 Gene3D Transferase(Phosphotransferase) domain 1 763 967 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0383 Sto-Chr6 4272887 4275926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0383 10 966 Receptor kinase-like Gene Family AT5G01890 61.019 0.0 1141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Sto6g0383 Pkinase 1.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0383 - - gmx:100813535 1526.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0383 6 4272887 4275926 Sto6g0383 6 4272887 4275926 ECH