Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0375 ATGAATTCAACAACTGCTGGATCATACTCCGTTTCCTGTGTATCGGGAAACAAGAACTGCCTCTTCTGCTGGATTTTGCTCTCCTTATTGCCAAAATATTTGGGAACACCATTTGCACGCATCAACTTTCTTCTCATTCAGGCAATTGATAGGAGTCCATCAGCATATTCTGGTTTGACAAAGACTGGCACATGCAAACCATTCCAGACCAAGATACACTTTCCTGCACCCCTCGCTGATACCGTAATTACAGATCACGTTGAGCTTGACTTCTCTGATGTCTTTGGTCCAGTTACGGTGCCTTCCCCAATAGAAGTGAATAATGTTGATTCTGCTACTGCTGAGCCCATAGAAGAATTGAGTGAACTCGTTTATGATGACCCAGCTGTCATTTTCACCCGCTCACATTCTTTGGTTGGCCCTTCTACTTGTGTTAGTCAATCACTGAAGCTTGGCAAACTCACCTTACATGAGACTGAGGATTCATTGGAACTAGTGCAGCATGTCGCTGGAGAGACCATTAAAGAAGTTGAGGAATCTTACATCGACAATGTCATTGTTGAGGAACCTATTGAAGATGATAATGGGCTTCTCATGAAGATCCAAAGAGTGAGCAAAgaagattttgatattttgaagGTTGTGGGTCAGGGAGCATTTGCAAAAGTGTATCAAGTGAGGAAAAAGGGTACTTCAGAAATATATGCAATGAAGGTAATGAGAAAGGACAAAATTATGGAAAAGAACCATGCTGAATATATGAAAGCAGAGAGGgatattttgaccaaaatagaaCACCCCTTTGTTGTTCAACTCAGATATTCTTTTCAGACAAAATACCGATTGTATCTTGTCCTGGATTTTGTAAATGGGGGCCATCTCTTCTTTCAGCTTTATCACCATGGCCTTTTCAGAGAGGATCTAGCACGCATATATGCTGCTGAGATTGTTTCTGCAGTTTCCCATCTCCATGCAAATGGAATAATGCACAGGGATCTAAAACCTGAAAATATTCTGCTGGATGCTGATGGCCACGTTATGCTAACGGATTTTGGCTTGGCTaagcaatttgaaaataatacaAGGTCTAATTCCATGTGTGGAACAATAGAGTACATGGCACCTGAAATTATTCTTGGTAAGGGCCATGATAAGGCAGCTGACTGGTGGAGTGTAGGAATCCTACTGTTTGAGATGCTCACTGGAAAGCCTCCCTTTTGTGGTGGGAACCGTGAGAAGATTCAGCAGAAAATAGTCAAAGACAAGATCAAGCTGCCAGCATTTTTGTCAAGTGAAGCACATTCTCTGTTAAAAGGGCTGCTGCAGAAGGACGCAAGTAAGCGCTTAGGTAGTGGAACAAAGGGGATCCAGGAAATTAAAGATCACAGGTGGTTTAAGCCAATCAATTGGAGGAAGTTGGATGCACGAGAGATCCAACCCAGCTTTCGTCCTGACGTCGCTGGGAAGCACTGTGTTGCCAACTTTGAGAAGCGCTGGACTGATATGCCTGTTGTGGACTCTCCAGCTGCTAGCCCCAATGGTGGAAATCCTTTCAAAGACTTCAGTTATGTGAGGCCTGCTGCCTCTTTCCTTCAGAGGAATAGCCCTGCTTTCTAG 1617 0.423 MNSTTAGSYSVSCVSGNKNCLFCWILLSLLPKYLGTPFARINFLLIQAIDRSPSAYSGLTKTGTCKPFQTKIHFPAPLADTVITDHVELDFSDVFGPVTVPSPIEVNNVDSATAEPIEELSELVYDDPAVIFTRSHSLVGPSTCVSQSLKLGKLTLHETEDSLELVQHVAGETIKEVEESYIDNVIVEEPIEDDNGLLMKIQRVSKEDFDILKVVGQGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAERDILTKIEHPFVVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHHGLFREDLARIYAAEIVSAVSHLHANGIMHRDLKPENILLDADGHVMLTDFGLAKQFENNTRSNSMCGTIEYMAPEIILGKGHDKAADWWSVGILLFEMLTGKPPFCGGNREKIQQKIVKDKIKLPAFLSSEAHSLLKGLLQKDASKRLGSGTKGIQEIKDHRWFKPINWRKLDAREIQPSFRPDVAGKHCVANFEKRWTDMPVVDSPAASPNGGNPFKDFSYVRPAASFLQRNSPAF 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0375 538 ProSitePatterns Protein kinases ATP-binding region signature. 215 238 IPR017441 GO:0005524
Sto6g0375 538 SMART serkin_6 209 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0375 538 ProSiteProfiles AGC-kinase C-terminal domain profile. 466 533 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto6g0375 538 Pfam Protein kinase domain 210 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0375 538 SUPERFAMILY Protein kinase-like (PK-like) 207 525 IPR011009 -
Sto6g0375 538 PANTHER RIBOSOMAL PROTEIN S6 KINASE 54 536 - -
Sto6g0375 538 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 54 536 - -
Sto6g0375 538 SMART pkinase_C_6 466 525 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto6g0375 538 ProSiteProfiles Protein kinase domain profile. 209 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g0375 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
Sto6g0375 538 Gene3D Phosphorylase Kinase; domain 1 207 506 - -
Sto6g0375 538 Gene3D Transferase(Phosphotransferase) domain 1 289 484 - -
Sto6g0375 538 Pfam Protein kinase C terminal domain 487 523 IPR017892 GO:0004674|GO:0005524|GO:0006468
Sto6g0375 538 CDD STKc_AGC 215 465 IPR045270 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0375 Sto-Chr6 4199370 4202890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0375 54 535 AGC Kinase Gene Family AT3G08720 67.901 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Sto6g0375 Pkinase 3.9e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0375 K04688 - gmx:100805922 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0375 6 4199370 4202890 Sto6g0375 6 4199370 4202890 ECH