Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0345 ATGTCAAATTTTGACCAAGTTGAGCCATCATCAATATTACCTAAATATGCtgattcttcttcatcatcatcatcaatggcCTACATAAGAGCCTCATGCAAGACCACACTCTACTCAAATCTATGCATTCAAAGCCTTTCCAAATTTGGCCATTATTCCCCATTACAACAAAACCCTCAACAACTACCTCAAATTGCCTTGTCCGTGAGCCACTCAAGAGCCCTACAAACTAGGGCATACTTGTTGGGACTCTCCATTCAGCTCAACAACACAATAATGAAGAAGAATGACTTATACCTTGATGTGCAAAATTGCTTGAACCAAATTAATGATAGTGTGGACCAGCTTGGCCAATCCATCCAGGAGCTTCGACGGATGAATTTACCGAAAGATGTTGTCGCGGTCAATATTGATGACAGCTTCTTGTGGCACATTAGTAACGTCGAGACGTGGGTGAGCGCGGCCTTAACCGATGCTAGCACATGCGTGAACTTGTTTAATCCTGACCCTAAATAtaaagcagcagcagcagcagctagAGCCAAACCTTGA 552 0.3859 MSNFDQVEPSSILPKYADSSSSSSSMAYIRASCKTTLYSNLCIQSLSKFGHYSPLQQNPQQLPQIALSVSHSRALQTRAYLLGLSIQLNNTIMKKNDLYLDVQNCLNQINDSVDQLGQSIQELRRMNLPKDVVAVNIDDSFLWHISNVETWVSAALTDASTCVNLFNPDPKYKAAAAAARAKP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0345 183 PANTHER BNAANNG18590D PROTEIN 17 176 - -
Sto6g0345 183 Coils Coil 106 126 - -
Sto6g0345 183 TIGRFAM PME_inhib: pectinesterase inhibitor domain 22 172 IPR006501 GO:0004857
Sto6g0345 183 SMART PMEI_2 24 179 IPR006501 GO:0004857
Sto6g0345 183 CDD PMEI-like_3 31 163 - -
Sto6g0345 183 Pfam Plant invertase/pectin methylesterase inhibitor 28 169 IPR006501 GO:0004857
Sto6g0345 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 182 IPR035513 -
Sto6g0345 183 PANTHER PECTINESTERASE INHIBITOR-LIKE 17 176 - -
Sto6g0345 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 173 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0345 Sto-Chr6 3929657 3930304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0345 29 167 Carbohydrate Esterase AT5G53370 28.873 2.25e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0345 - - mtr:MTR_4g025590 142.895