Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0344 ATGGCACAACTGCTCAACCTCAACCTTACATCACTTGTGATAATGTTCATCTCTCTCATGTCAATTTTGTACCAAGTTGAGCCATCATCATTAATACCTAAACCTGCTGATCAGTCATCAATGGCCTACATAAGAGCCTCATGCAAGACCACACTTTACTCAAATCTATGCATTCAAAGCCTTTCCAAATTTGGCCATTATTCCCCATTAGAACAAAACCCTCAACAACTACCTCAAATTGCCTTGTCCGTGAGCCACTCAAGAGCCCTACAAACTAGGGCATACTTGTTGGGACTCTCCATTCAGCTCAACAACACAATGAAGAAGAATGATCTATACCTTGATGTGCAAAATTGCTTGAACCAAATTAATGATAGCGTGGACCAGCTTGGCCAATCCATCCAAGAGCTTCGACGGATGAATTTGCCGAAAGATATTGTCGCGGTCAATATCGATGACAACTTCTTGTGGCACATTAGTAACGTCGAGACGTGGGTGAGCGCGGCCTTAACCGATGCTAGCACATGCGTGAACTTGTTTAATCCTGACAGTAGGATGAGTAAAGTGAAGGCCGGAATTAGGGTTAGGGCACTAAATGTTGCACAAGTTACTAGTAATGCACTTGCCTTGTTTCATGGATATGCAGCTAATGATGTAAaggtttaa 666 0.4234 MAQLLNLNLTSLVIMFISLMSILYQVEPSSLIPKPADQSSMAYIRASCKTTLYSNLCIQSLSKFGHYSPLEQNPQQLPQIALSVSHSRALQTRAYLLGLSIQLNNTMKKNDLYLDVQNCLNQINDSVDQLGQSIQELRRMNLPKDIVAVNIDDNFLWHISNVETWVSAALTDASTCVNLFNPDSRMSKVKAGIRVRALNVAQVTSNALALFHGYAANDVKV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0344 221 SMART PMEI_2 39 210 IPR006501 GO:0004857
Sto6g0344 221 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 214 IPR006501 GO:0004857
Sto6g0344 221 CDD PMEI-like_3 46 216 - -
Sto6g0344 221 Coils Coil 120 140 - -
Sto6g0344 221 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 217 - -
Sto6g0344 221 Pfam Plant invertase/pectin methylesterase inhibitor 43 210 IPR006501 GO:0004857
Sto6g0344 221 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 213 IPR035513 -
Sto6g0344 221 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 212 IPR035513 -
Sto6g0344 221 PANTHER BNAANNG18590D PROTEIN 8 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0344 Sto-Chr6 3924819 3925785 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0344 4 213 Carbohydrate Esterase AT5G53370 24.645 6.67e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0344 - - gmx:100791798 189.119