Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0336 CTGGCATCATGGAGCCGATCAACATCCGAAGCCGATTTCAGAGTGGCTCAGGACGGCTCAGGCTCCCACGAAACCATCGGAGAAGCCATTCAAGCCGTGGCTTCCATGGGTCATAACCGTCCAGAAAGGGTAATAATACATGTGAAGTCAGGAGTGTACAAGGAGAAGGTGGAGATTGGATACAAACTCAAGAACATAATGCTCGTCGGAGACGGCATCGACGAGACGATCATCACCGGCAGCCGAAGCGTCGCTCAGGGCTCCACCACTCTCGCCTCCGCCTCCTTCGATGTATCAGGCGACGGATTCTGGGCTCGAGATCTAACCTTCGAGAACACCGCAGGCCCAGAGAAGCACCAAGCAGTTGCCATAAAGGTAAGCTCAGATCGCTCCGTCTTCTATAGATGCAGCTTCAAAGCCTACCAAGACACTCTCTATGTCCACTCCAACCGTCAATTCTACCGCGACTCCATCATCTCCGGCACAATCGACTTCATCTTCGGCGATGCCTCCGTGATCTTCCAAAACTGCGATATCCTCGTTCGAAAGCCGATGTCGCATCAGTCCAATTTCATCACCGCGCAAGGACGGGACGACCCTAATCAACCCACCGGGATCTCGATCCAAAATTCTAGGGTGAGACCTAGCTCGGATTTGGCTCCATCGAAGGGTCAATTTAGGACGTATTTGGGACGACCGTGGAAGAAGTACTCGAGGACTGTGTTCTTGAGGAGTGATTTGGATGGCTTGATTGACCCTAGAGGGTGGGGGGAGTGGAGCGGTAATTTTGGGATTTCGACTCTGTACTATGGGGAGTATATGAATACGGGGAGTGGGGCTTCGGTTGAGAAGAGGGTGAATTGGCCGGGATTTCATGTGCTGCGTGGTGCCGGCGAGGCGAGGCCGTTTAGTGTGGATGAGTTTTTAAACGGTGATCAGTGGATTCCAGCCACCGGTGTGCCGTTTTCCGATGGAATTTAG 981 0.5291 LASWSRSTSEADFRVAQDGSGSHETIGEAIQAVASMGHNRPERVIIHVKSGVYKEKVEIGYKLKNIMLVGDGIDETIITGSRSVAQGSTTLASASFDVSGDGFWARDLTFENTAGPEKHQAVAIKVSSDRSVFYRCSFKAYQDTLYVHSNRQFYRDSIISGTIDFIFGDASVIFQNCDILVRKPMSHQSNFITAQGRDDPNQPTGISIQNSRVRPSSDLAPSKGQFRTYLGRPWKKYSRTVFLRSDLDGLIDPRGWGEWSGNFGISTLYYGEYMNTGSGASVEKRVNWPGFHVLRGAGEARPFSVDEFLNGDQWIPATGVPFSDGI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0336 326 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Sto6g0336 326 Gene3D - 6 326 IPR012334 -
Sto6g0336 326 MobiDBLite consensus disorder prediction 193 219 - -
Sto6g0336 326 MobiDBLite consensus disorder prediction 1 15 - -
Sto6g0336 326 MobiDBLite consensus disorder prediction 1 22 - -
Sto6g0336 326 Pfam Pectinesterase 14 312 IPR000070 GO:0030599|GO:0042545
Sto6g0336 326 SUPERFAMILY Pectin lyase-like 7 325 IPR011050 -
Sto6g0336 326 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 2 324 - -
Sto6g0336 326 PANTHER PECTINESTERASE 2 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0336 Sto-Chr6 3870293 3872750 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0336 1 326 Carbohydrate Esterase AT3G60730 67.178 2.01e-170 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0336 K01051 - gmx:100792852 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0336 6 3870293 3872750 Sto6g0336 6 3870293 3872750 ECH