Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0335 ATGGACTCGGATGTGACCATATTTCTTAAGAGCGTCTCTCAAAGTGACATCAAGTCATGGTGTagccaaacccctaaccctgaGCCATGTGAGTATGCTTTCTTGAGCAATGAAGCCACCACCCTCACCACCAAGAAACCCATTAAGACCAAGTCCGATTTCTTTAGGGCTACCCTACAATTAGCCCTACATAGAACCCTAAATGGACAAACCACGGCTCGCTCATTGGGTCCCAAATGTAGGAACCCACGTGAGCATGCTGCATGGGCCGATTGCCTTGACCTCTACGCCTACACCGTCCTCAGGCTCaacaaaaccctagacccgtaCGCCAGGTGCACCCACCTGGAGACCCAGACCTGGCTCAGCACGGCCCTGACCAACCTCGAGACCTGCAAAGCCGGGTTCGATGACCTCGGGGTGGGCGAGTACATGTGGTCCTTGATTTCCAACAATAATGTCACAAAGTTGCTAAGCAATGGCTTGGCTCTCAATTACAACGATTCGAAATCATCGtcgtcctcctcctcctctactACTACTACTGGCAGGTTTCCATCCTGGGTCAAGCCTGGCGACCGGAAGCTATTACAATCGTCGTCGCCGGCCTCTCAGGCTAATGTGGTGGTGGCCAAGGACGGATCCGGTAAGTTCACGACCGTGAAGGACGCCGTGAATGCGGCGCCGAGTAGTGGTGGGAGGTATGTGATATATGTGAAGGGTGGAGTGTACAATGAACAAGTTCAAGTGACAAAGAAGAATATTATGTTGGTAGGAGATGGTATAGGGAAGACTATTATTACTGGTAGCAAAAGTGTTGGAGGAGGCAGCACAACCTTTAATTCAGCCACAGTTGCTGCTGTTGGAGATGGATTTATTGCTAGAGACATCACATTTAGGAACACTGCTGGAGCATCAAACCATCAAGCAGTGGCCTTCCGATCAGGCTCAGATCTTTCAGTGTTTTACAAATGTGGCTTCGAGGGCTATCAAGACACACTCTATGTCCATTCCGAGAGACAATTCTATAGAGAATGTGACATTTATGGCACAGTTGACTTCATCTTTGGCAATGCTGCTGTTGTTTTACAAAATTGCAACATTTACGCCCGAAACCCTCCCCAGAAGACCATCACGGTCACCGCCCAGGGCCGGACCGATCCGAACCAAAACACGGGGATTGTGATTCACAACTCCAAGGTCACGGCGGCCTCGGATTTGTCCAATCCGGGATCGGTCAAGGCCTATCTGGGGAGGCCTTGGCAGAAATATTCAAGGACAGTCTTCATGACCACTTATCTTGATAGTTTGATTAATCCTGCTGGTTGGATGCCTTGGAGTGGAAGTTTTGCCCTAGATACTTTGTACTATGCTGAATATGCAAATACAGGCCCTGGTTCTTCCACATCAAATAGGGTTACTTGGAAGGGATACCATATCCTTACAAGTGCCTCTCAAGCTTCACCATTCAcagttgggaacttcattgctGGAAACTCATGGTTACCATCCACTGAACTGGGTGAAACTAGTAATGCTGGTGGGCGACTCCCAACAATTGATGAAGAGATGACGACTGAGATAGTGACTTAA 1593 0.4633 MDSDVTIFLKSVSQSDIKSWCSQTPNPEPCEYAFLSNEATTLTTKKPIKTKSDFFRATLQLALHRTLNGQTTARSLGPKCRNPREHAAWADCLDLYAYTVLRLNKTLDPYARCTHLETQTWLSTALTNLETCKAGFDDLGVGEYMWSLISNNNVTKLLSNGLALNYNDSKSSSSSSSSTTTTGRFPSWVKPGDRKLLQSSSPASQANVVVAKDGSGKFTTVKDAVNAAPSSGGRYVIYVKGGVYNEQVQVTKKNIMLVGDGIGKTIITGSKSVGGGSTTFNSATVAAVGDGFIARDITFRNTAGASNHQAVAFRSGSDLSVFYKCGFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVLQNCNIYARNPPQKTITVTAQGRTDPNQNTGIVIHNSKVTAASDLSNPGSVKAYLGRPWQKYSRTVFMTTYLDSLINPAGWMPWSGSFALDTLYYAEYANTGPGSSTSNRVTWKGYHILTSASQASPFTVGNFIAGNSWLPSTELGETSNAGGRLPTIDEEMTTEIVT 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0335 530 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 15 165 IPR035513 -
Sto6g0335 530 PANTHER PECTINESTERASE 10 511 - -
Sto6g0335 530 SUPERFAMILY Pectin lyase-like 201 507 IPR011050 -
Sto6g0335 530 Pfam Plant invertase/pectin methylesterase inhibitor 16 164 IPR006501 GO:0004857
Sto6g0335 530 MobiDBLite consensus disorder prediction 169 186 - -
Sto6g0335 530 Gene3D Invertase/pectin methylesterase inhibitor family protein 11 167 IPR035513 -
Sto6g0335 530 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 165 IPR006501 GO:0004857
Sto6g0335 530 CDD PMEI-like_3 19 167 - -
Sto6g0335 530 PANTHER PECTINESTERASE 10 511 - -
Sto6g0335 530 ProSitePatterns Pectinesterase signature 2. 348 357 IPR033131 -
Sto6g0335 530 Gene3D - 202 512 IPR012334 -
Sto6g0335 530 Pfam Pectinesterase 207 499 IPR000070 GO:0030599|GO:0042545
Sto6g0335 530 SMART PMEI_2 12 164 IPR006501 GO:0004857
Sto6g0335 530 ProSitePatterns Pectinesterase signature 1. 231 250 IPR018040 -
Sto6g0335 530 MobiDBLite consensus disorder prediction 169 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0335 Sto-Chr6 3837350 3861505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0335 13 505 Carbohydrate Esterase AT2G45220 64.990 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0335 K01051 - gmx:100794948 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0335 6 3837350 3861505 Sto6g0335 6 3837350 3861505 ECH