Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0324 ATGGGGAAGAAGATTAAGGGCTTCAAGCTTGGAAGACGTCTCATTCGGGTCTCTGGATGGGTTTTCTGGAGATTCCGGACCCGACCCGGGTATCAAAAGTTGGGCTCATCGGCGAGTCGGAAGCCCATGGAGAAGGTTCTCAAGTGGGGCCGAAAGTTGGCGAGACAAGCGAGATCGGTGTGTGTCGGGTCGGGCTATGTCCCGATAGGATCCGAACCGGTGAAGGAGGAGTTGTCGCCGGCGGTGCCGAAGGGTCATCTTGCGGTGTACGTGGGCCGGGAAGATGGGGAGTTTCACCGGGAATTGGTGCCGGTGATTTACTTCAACCACCCTTTGTTTGGGGAGCTGCTGAAGGAAGCAGAGAAGGAGTTCGGGTTTCAGCACCCCGGTGGGATCACGATTCCTTGCCGGTTCACGGAGTTTGAACGGGTCAAGACCCGAATAGAATCCGGATACGTGGTTGTAAACTTGTAA 474 0.557 MGKKIKGFKLGRRLIRVSGWVFWRFRTRPGYQKLGSSASRKPMEKVLKWGRKLARQARSVCVGSGYVPIGSEPVKEELSPAVPKGHLAVYVGREDGEFHRELVPVIYFNHPLFGELLKEAEKEFGFQHPGGITIPCRFTEFERVKTRIESGYVVVNL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0324 157 Pfam Auxin responsive protein 76 145 IPR003676 GO:0009733
Sto6g0324 157 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 151 IPR003676 GO:0009733
Sto6g0324 157 PANTHER SMALL AUXIN-UP RNA-RELATED 5 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0324 Sto-Chr6 3734982 3735586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0324 80 150 Calmodulin-binding Proteins AT3G43120 46.479 3.06e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0324 K14488 - gmx:100808164 201.445