Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0322 atgtctgCCTCATCATCTTCCACTTCTTCCTTCTCACCGGACCACCACCTCTCTCCCTCCGACCAGCTCTGCTATGTCCAATGCAATTTCTGTGACACTGTTCTtgcgGAGGAGATTAGAAGTGCACCATCTTCAAATATGCAGATGATGAACCATAATCAGCTTCCATACCCAAATCATGATTCCCTTATGACGAGCACCATGAGAGGAGTAGGAGGAGGACCTGAGGAAATTCCTAAGCCTCCACCTGCAGCTAACAGACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAATCGCTTCATCAAGGACGAGATCCAACGCATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCTGCTGCAAAGAATTGGGCCCATTTCCCACACATCCATTTCGGACTGATGCCTGATCATCAACCCGTGAAGAAACCTAACGTGCGCCAGGATGGAGAGGACGTGCTTATGAAAGATGGATTTTTTGCTCCTGCAAATCTAGGTGTCTCTCCCTTTTAG 531 0.4708 MSASSSSTSSFSPDHHLSPSDQLCYVQCNFCDTVLAEEIRSAPSSNMQMMNHNQLPYPNHDSLMTSTMRGVGGGPEEIPKPPPAANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKPNVRQDGEDVLMKDGFFAPANLGVSPF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0322 176 PANTHER PROTEIN YABBY 4 6 44 - -
Sto6g0322 176 PANTHER PROTEIN YABBY 4 44 174 - -
Sto6g0322 176 SUPERFAMILY HMG-box 79 134 IPR036910 -
Sto6g0322 176 PANTHER PROTEIN YABBY 6-RELATED 44 174 IPR006780 GO:0007275
Sto6g0322 176 PANTHER PROTEIN YABBY 6-RELATED 6 44 IPR006780 GO:0007275
Sto6g0322 176 Gene3D High mobility group box domain 79 135 IPR036910 -
Sto6g0322 176 Pfam YABBY protein 69 140 IPR006780 GO:0007275
Sto6g0322 176 MobiDBLite consensus disorder prediction 69 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0322 Sto-Chr6 3693490 3699463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g0322 77 176 C2C2-YABBY Transcription Factor Family AT2G45190 79.808 3.52e-53 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Sto6g0322 YABBY 8.4e-40 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0322 K25796 - gmx:100781267 246.514