Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g0311 ATGGTTTCTTCGTCCTCCTCACACACTCTTCCTCGGTGGCTCCAAGTCCTCCTCACAGAGAAGTTCTACAACGCCTGCATAATTCACGAAGACGCCAAGAAGAACGAGAAGAATGTCTACTGTTTGGATTGTTGCATCAGCCTCTGCCCTCACTGTTTAGCCCCACATCGCTCACACCCACTCTTCCAGATTAGAAGATATGTTTATCACGACGTCATTAGGCTCGACGACGCTGCCAAATTAATTGACTGCACTTCCGTTCaaTCATACACCACGAATAGTGCAAAAGTGGTGTTTTTGAACCAAAGGCCTCAGACCAGAAATTTCAGAGGCTCCGGCAATTTCTGCAGCACCTGTGACAGAAGCCTGCAAGACCCATATCAATTTTGCTCCCTCTCTTGCaagATTGATTATCTCATGAGGACAACTGGTGGGCTCGCTGGGCACTTATTTGAGTGCAAGTTCTTCCCATTCTCCGATTCGGGGCTGGACGAGGGTTTTATCATGACGCCCGAGTCGGTCCTCGAACCGGTCGGTTCGAACCGGACTTCTTCCGGTTCGGGCGGCCACGGCGGGGTTGACTGCCGGGCTCTTGCTTGCACGGCCACCACGGAGGTTGTCAGGAAGAAGAGGACTTCCGGCGGCGGCGGTTCGGCGAACCGGACGGGTTGTCGGGCGGTGTGTTCGCCGGCGCCGGAGATCTCGGTGGGTGGTCTGATGAACCGGAGGAAAGGGACGCCTCAGAGGGCCCCACTGTATTGA 762 0.542 MVSSSSSHTLPRWLQVLLTEKFYNACIIHEDAKKNEKNVYCLDCCISLCPHCLAPHRSHPLFQIRRYVYHDVIRLDDAAKLIDCTSVQSYTTNSAKVVFLNQRPQTRNFRGSGNFCSTCDRSLQDPYQFCSLSCKIDYLMRTTGGLAGHLFECKFFPFSDSGLDEGFIMTPESVLEPVGSNRTSSGSGGHGGVDCRALACTATTEVVRKKRTSGGGGSANRTGCRAVCSPAPEISVGGLMNRRKGTPQRAPLY 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g0311 253 Pfam PLATZ transcription factor 65 136 IPR006734 -
Sto6g0311 253 PANTHER - 11 253 - -
Sto6g0311 253 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 11 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g0311 Sto-Chr6 3581825 3582930 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Sto6g0311 PLATZ 2.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g0311 - - pvu:PHAVU_008G142900g 424.476